MidgeBase gene description page [Pn.12528]
Outline
| Gene ID | Pn.12528 |
| Type | Protein coding gene |
| Scaffold | PnScaf16823 |
| Start | 2275 |
| End | 4375 |
| Direction | + |
Sequence
Transcript: 1803 (bp)
ATGCCCGTAGTCAACAGCAGCAGCGGTGGCAACAATAATGACTCGTCGACGCTTGCAAATGACGTTAAAGTGAAAATCGCCTACAATGGCGAGGTGCTCATCTTTTACATCGACGAGAACATCACGTACGAGGAGCTGTGCAAGGAAATCCGCGGCATTTGTCGCTTTGCGCCCGACCAAGTCTTCACGATGAAGTGGATCGACGAGGAGAACGACCCGTGCACGATAAGCTGTCAGATGGAGCTGAACGAGGCGATTCGTTTGTACGAGGTGAATCGCGACTCGGAGCTCTTCATACACGTCTTTCCTAATGCGCCCGCCGCGCCCGGGCTCTCGTGCATCGGCGAGGACAAGAGCATCTACAGACGCGGCGCAAGACGGTGGCGCAAGCTCTACCGCATCAACGGACACATCTTTCAGGCTAAGCGCTTCAATCGGCGCGCGTTCTGCGCCTTCTGTCACGATCGCATTTGGGGCCTCGGACGGCAGGGCTTCAAGTGCATCCAGTGCAAGCTACTGGTACATAAGAAGTGCCACAAGCTACTTCAGAAGCCCTGCAACGAGCAGATGGAACCGCTCGACCGAATCGACCGGAATGGCGAGAGTGAGCCGAAACTGGCACCCGGAGCCGAAGTTTCATCGACAACAATAGTCGAGTACCAGCCCGGCGAGGGCGACCAGGTGGCGGTCGAGTCACCGGCACAGCCGCACGCGGACGAGCCGCTCGAGCCGGGCTCGCAGCGGCAGTACTCGCTGTTGGACTTCGAACTGATTCGCGTGATTGGCCGCGGCAGCTACGCAAAGGTGCTAATGGTGGAGCTCAAGCGCACCAAACGAATTTACGCGATGAAGGTCATTAAGAAGGCGCTGGTGACAGACGACGAGGACATCGATTGGGTGCAAACCGAGAAGCACGTGTTCGAGACGGCCTCTAATCATCCGTTCCTCGTGGGCCTGCACTCGTGCTTCCAAACACCCTCGCGGCTCTTCTTCGTCATCGAGTTCGTGCGAGGTGGCGACCTGATGTTCCACATGCAGCGGCAGCGACGGCTGCCTGAGGAGCATGCGCGATTTTATGCGGCCGAGATCAGTTTAGCACTCAACTTTCTCCATGAGAAGGGCATCATTTATCGTGACCTCAAGCTCGACAACGTCCTCCTCGATCACGAGGGCCACATCAAGCTCACCGACTACGGCATGTGCAAAGAGGGCATCAAGACGGGCGACACGACCGCTACCTTCTGCGGAACGCCCAATTATATCGCTCCTGAAATTCTGCGTGGCGAGGATTATGGATTTAGCGTCGACTGGTGGGCGCTCGGCGTGCTTCTCTACGAAATGCTCGCAGGACGATCGCCCTTCGACATCGCCGGCGCCTCGGAAAATCCCGATCAAAACACGGAGGACTATCTCTTCCAAGTGATTCTCGAAAAGACAATTCGCATTCCGCGGTCGCTGAGCGTAAAGGCAGCTTCCGTTCTCAAGGGTTTCCTCAACAAGAACCCGGCGGACCGGTTGGGTTGTAGTCGAGAGGGCGCCTTCATGGACATCGTGAATCATCCGTTCTTCAAGCAAATCGATTGGAACATGCTCGAACAGAAACAGGTTACGCCGCCGTTCAAGCCGCGATTAGATAATGAGAGAGACATAAGAGATGACCTAGCCAATTTCCCTCCTGAATTCACCGATGAGCCGGTCCATTTGACACCTGACGATGAAAAAATCATCGAGAAAATCGATCAATCGGAGTTCGAGGGATTCGAATATGTTAATCCCCTGCTGATGTCGCTCGAAGACTGCGTT
Protein: 601 (aa)
MPVVNSSSGGNNNDSSTLANDVKVKIAYNGEVLIFYIDENITYEELCKEIRGICRFAPDQVFTMKWIDEENDPCTISCQMELNEAIRLYEVNRDSELFIHVFPNAPAAPGLSCIGEDKSIYRRGARRWRKLYRINGHIFQAKRFNRRAFCAFCHDRIWGLGRQGFKCIQCKLLVHKKCHKLLQKPCNEQMEPLDRIDRNGESEPKLAPGAEVSSTTIVEYQPGEGDQVAVESPAQPHADEPLEPGSQRQYSLLDFELIRVIGRGSYAKVLMVELKRTKRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMFHMQRQRRLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIKTGDTTATFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLAGRSPFDIAGASENPDQNTEDYLFQVILEKTIRIPRSLSVKAASVLKGFLNKNPADRLGCSREGAFMDIVNHPFFKQIDWNMLEQKQVTPPFKPRLDNERDIRDDLANFPPEFTDEPVHLTPDDEKIIEKIDQSEFEGFEYVNPLLMSLEDCV
| Type | Start | End | Length |
| CDS |
2275 |
3538 |
1264 |
| CDS |
3769 |
4156 |
388 |
| CDS |
4222 |
4372 |
151 |
| intron |
3539 |
3768 |
230 |
| intron |
4157 |
4221 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001361462 |
GA10200 [Drosophila pseudoobscura pseudoobscura] gb|EAL26040.1| GA10200 [Drosophila pseudoobscura pseudoobscura] |
0.0 |
| InterPro |
IPR000270 |
Phox/Bem1p |
|
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR012233 |
Protein kinase C, zeta/iota |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR020454 |
Diacylglycerol/phorbol-ester binding |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| InterPro |
IPR000961 |
AGC-kinase, C-terminal |
|
| InterPro |
IPR017892 |
Protein kinase, C-terminal |
|
| InterPro |
IPR002219 |
Protein kinase C-like, phorbol ester/diacylglycerol binding |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(BP) |
GO:0035556 |
intracellular signal transduction |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0008270 |
zinc ion binding |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF07649.7 |
C1-like domain |
0.2 |
| Pfam |
PF00628.24 |
PHD-finger |
0.5 |
| Pfam |
PF00564.19 |
PB1 domain |
6e-14 |
| Pfam |
PF01636.18 |
Phosphotransferase enzyme family |
0.068 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
5.7e-33 |
| Pfam |
PF00069.20 |
Protein kinase domain |
1.2e-63 |
| Pfam |
PF06293.9 |
Lipopolysaccharide kinase (Kdo/WaaP) family |
0.095 |
| Pfam |
PF00130.17 |
Phorbol esters/diacylglycerol binding domain (C1 domain) |
3.3e-12 |
| Pfam |
PF00433.19 |
Protein kinase C terminal domain |
2.3e-10 |
| Pfam |
PF14446.1 |
Prokaryotic RING finger family 1 |
0.19 |
| Pfam |
PF13901.1 |
Domain of unknown function (DUF4206) |
0.046 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL002885 |
| S. invicta |
SI2.2.0_06688 |
| T. castaneum |
TC005980 |
| P. humanus |
PHUM529700-PA |
| P. vanderplanki |
Pv.02261 |
| H. sapiens |
ENSP00000424398 |
| H. sapiens |
ENSP00000383711 |
| H. sapiens |
ENSP00000295797 |
| P. vanderplanki |
Pv.02525 |
| H. sapiens |
ENSP00000426412 |
| A. mellifera |
GB19525-PA |
| D. plexippus |
DPOGS209483PA |
| C. quinquefasciatus |
CPIJ013835 |
| H. sapiens |
ENSP00000383712 |
| D. melanogaster |
FBgn0261854 |
| H. sapiens |
ENSP00000367830 |
| N. vitripennis |
NV14702-PA |