MidgeBase gene description page [Pn.12467]
Outline
| Gene ID | Pn.12467 |
| Type | Protein coding gene |
| Scaffold | PnScaf16501 |
| Start | 696 |
| End | 2133 |
| Direction | + |
Sequence
Transcript: 927 (bp)
ATGCAAAAGTATGAAAAGTTGGAAAAGATTGGCGAGGGAACGTATGGAACGGTGTTTAAGGGTAGGAACCGCGAGACACTGGAAATCGTGGCGCTCAAGAGAGTGCGATTAGCGAAAATTTACTACTTGAAAAAAGTCTGCTTAAATGTTCTAAAAATAAAATCGCTTGCAGATGAGGACGATGAGGGCGTTCCGTCATCGGCGCTGCGTGAAATCTGCCTGCTGAAGGAGCTCAAACACAAGAACATCGTGCGCCTGTACGACGTGCTGCACTCGGACAAGAAACTCACACTTGTTTTCGAGCATTGCGACCAAGATCTAAAGAAGTACTTCGACTCACTCAACGGCGACATCTCGCTCGACATCGTCAAGTCCTTCATGTACCAACTGTTGCGAGGACTTGCCTTCTGCCACAGCCACAACGTTCTCCATCGTGACCTGAAGCCGCAGAATCTGCTAATTAACAAGAACAATGAGCTGAAGCTCGCCGACTTTGGCCTCGCGCGTGCCTTCGGCATCCCCGTCAAATGCTATTCTGCCGAGGTCGTCACCCTCTGGTACCGCCCGCCCGACGTTCTCTTCGGCGCGAAGCTCTACACCACCAGCATCGACTGCTGGTCCGCTGGCTGCATCTTTGCTGAGCTCGCAAACGCCGGCCGGCCGCTCTTTCCCGGCTCCGATGTCGATGACCAGTTGAAGCGCATCTTTAAGCTTTTGGGAACGCCCACTGAGGATACATGGCCCGGACTTACACAGCTTTCGGACTACAAACCCTTTCCTCTTTATCCAGCAACAAACAATTGGAGTCAAGTGGTGCCAAGACTGAACAGCAAGGGACGCGATTTGCTTCAGAAACTGCTCGTGTGTCGGCCGACTTTGCGTTTGAGTGCCGAACAGGCCATGGCACATCCTTATTTCACTGAAAAT
Protein: 309 (aa)
MQKYEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLAKIYYLKKVCLNVLKIKSLADEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEHCDQDLKKYFDSLNGDISLDIVKSFMYQLLRGLAFCHSHNVLHRDLKPQNLLINKNNELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDCWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGLTQLSDYKPFPLYPATNNWSQVVPRLNSKGRDLLQKLLVCRPTLRLSAEQAMAHPYFTEN
| Type | Start | End | Length |
| CDS |
696 |
746 |
51 |
| CDS |
810 |
870 |
61 |
| CDS |
1121 |
1789 |
669 |
| CDS |
1985 |
2130 |
146 |
| intron |
747 |
809 |
63 |
| intron |
871 |
1120 |
250 |
| intron |
1790 |
1984 |
195 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001659377 |
cdk5 [Aedes aegypti] gb|EAT39563.1| cdk5 [Aedes aegypti] |
1e-159 |
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF00069.20 |
Protein kinase domain |
1.6e-68 |
| Pfam |
PF01636.18 |
Phosphotransferase enzyme family |
0.028 |
| Pfam |
PF01633.15 |
Choline/ethanolamine kinase |
0.26 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
2.1e-32 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL008637 |
| H. sapiens |
ENSP00000297518 |
| A. aegypti |
AAEL008648 |
| B. mori |
BGIBMGA004018-TA |
| D. plexippus |
DPOGS211766PA |
| C. quinquefasciatus |
CPIJ000065 |
| T. castaneum |
TC009740 |
| P. humanus |
PHUM263550-PA |
| M. musculus |
ENSMUSG00000028969 |
| H. melpomene |
HMEL007938-PA |
| A. mellifera |
GB11941-PA |
| A. gambiae |
AGAP005772 |
| D. melanogaster |
FBgn0013762 |
| N. vitripennis |
NV14994-PA |
| H. sapiens |
ENSP00000419782 |
| P. vanderplanki |
Pv.12145 |