MidgeBase gene description page [Pn.12432]
Outline
| Gene ID | Pn.12432 |
| Type | Protein coding gene |
| Scaffold | PnScaf16380 |
| Start | 66296 |
| End | 67668 |
| Direction | + |
Sequence
Transcript: 906 (bp)
ATGATTGAAAAGCATTTCAGTCAATTTGATACATTAAATCAGAAAATAAGCGAGACTCTCGTGATGATGGAAAAGTTGCTGCCTCTGTTCGCAGTATTTTCGTTGAGCGCGATAGTCATAGAAGCCGCAGTAACAAATGTGTCGTCAGATAAAGCGCAGCTTTTCGAGCGGAAGGTGCAGGGAAGAATTGTCGGTGGTTCGCGATCAAATACAGGTCAATTCCCCTACACGGTGTCAATTAGAGCATTTAATGGCACATCTACGTCCTTCTGCGGAGGTTCGATCATTTCCTACACTTTCGTTCTGACCGCTGCGCACTGCACTCGCGGCTACTCGGACTTCGAGATCGGCATGGGCTCGGCCGTGCTTCAGAAGCCCTTCTTTCAGATCCTCACCTACGGCGGAGCGATTGAGCACCCGAACTTCAACCCCACCAACCTAAACCATGACATTTCGCTCATACAAGTGCCGCAGCTAGCCGAAAATGTACCTTCGATGACGCCAATCTTGCTTCCGAAGTTTTCGCATGCCGATAAGCCGTTTGTGGGCATGCAAGTGACAGTTTCGGGCTTCGGAAGGACCTCGGACTCGTCGCAAAGCGTTTCGCCTTTCATGGAGTACGTGCAGCTGAAAATCATCGCAAACAAGGAGTGCTCGAGCATCTACGGCCGACGAATTGTCACAGACGACGTCATTTGTGCGAAGGGAATCGACAAAGCCTACAATGCGTGCGTCGGTGACAGTGGAGGCCCACTTGTGATGAGGGAGGGCGGACTTCCAGTGCAAGTTGGAATCGTGTCGTTTGTGAGCTCGCGAGGCTGTGCAGTCGGCGATCCGTCGGGCTACACAAAAGTCGCCAAGTATCTCAGTTGGATCTCTGCAAAAACTGGAATAAAAATTCGCAGA
Protein: 302 (aa)
MIEKHFSQFDTLNQKISETLVMMEKLLPLFAVFSLSAIVIEAAVTNVSSDKAQLFERKVQGRIVGGSRSNTGQFPYTVSIRAFNGTSTSFCGGSIISYTFVLTAAHCTRGYSDFEIGMGSAVLQKPFFQILTYGGAIEHPNFNPTNLNHDISLIQVPQLAENVPSMTPILLPKFSHADKPFVGMQVTVSGFGRTSDSSQSVSPFMEYVQLKIIANKECSSIYGRRIVTDDVICAKGIDKAYNACVGDSGGPLVMREGGLPVQVGIVSFVSSRGCAVGDPSGYTKVAKYLSWISAKTGIKIRR
| Type | Start | End | Length |
| CDS |
66296 |
66418 |
123 |
| CDS |
66473 |
66796 |
324 |
| CDS |
66856 |
67147 |
292 |
| CDS |
67255 |
67344 |
90 |
| CDS |
67589 |
67665 |
77 |
| intron |
66419 |
66472 |
54 |
| intron |
66797 |
66855 |
59 |
| intron |
67148 |
67254 |
107 |
| intron |
67345 |
67588 |
244 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001653940 |
serine protease [Aedes aegypti] gb|EAT38417.1| serine protease [Aedes aegypti] |
3e-61 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13365.1 |
Trypsin-like peptidase domain |
0.026 |
| Pfam |
PF00089.21 |
Trypsin |
3e-49 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ016012 |
| A. aegypti |
AAEL009689 |
| D. plexippus |
DPOGS211762PA |
| A. gambiae |
AGAP004741 |
| P. vanderplanki |
Pv.10419 |
| D. melanogaster |
FBgn0030688 |
| C. quinquefasciatus |
CPIJ019165 |