MidgeBase gene description page [Pn.12194]
Outline
| Gene ID | Pn.12194 |
| Type | Protein coding gene |
| Scaffold | PnScaf15791 |
| Start | 100 |
| End | 1102 |
| Direction | - |
Sequence
Transcript: 495 (bp)
ATGCATAATTTTTTATGCATAAAACCATATCACATTTCATATGAAGATCTATATTTCGCAGTGCTCAAACCCTTGAATATGAAGGAACACCGGGGGAAAATAATGATTGCTTGTGCTTGGATGGTATCCGCAGTATGCAGTGCTCCACAAGCATACATATTTCATCAAGAGAATCATCCCGATGTGAAGAATTATACGCAGTGTGTTACCTTTAATGTATTTGAATCAAAAAGTGTTGAGTTGATATATAATGCAGCCGTAATGGTCATGATGTACGCAGCTCCACTCATTATAATTACTTTTTCGTATGGATCAATCTACTTTGAGATATTTCAAAAGAGCCGAATGAAAAATTCCGATAGGTTTCGAAGGTCAAGTATTAATGTTTTGGGTCGTGCAAAAAGGCGAACATTAAGAATGACAATAACAATTGGTGAGTTTAGGCTTATCTGTGTGCTTTTAAATTTCTCTTTTCTTCTAGAATTATTTGTACGT
Protein: 165 (aa)
MHNFLCIKPYHISYEDLYFAVLKPLNMKEHRGKIMIACAWMVSAVCSAPQAYIFHQENHPDVKNYTQCVTFNVFESKSVELIYNAAVMVMMYAAPLIIITFSYGSIYFEIFQKSRMKNSDRFRRSSINVLGRAKRRTLRMTITIGEFRLICVLLNFSFLLELFVR
| Type | Start | End | Length |
| CDS |
103 |
239 |
137 |
| CDS |
464 |
581 |
118 |
| CDS |
657 |
746 |
90 |
| CDS |
828 |
927 |
100 |
| CDS |
1053 |
1102 |
50 |
| intron |
240 |
463 |
224 |
| intron |
582 |
656 |
75 |
| intron |
747 |
827 |
81 |
| intron |
928 |
1052 |
125 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ABD60146 |
adipokinetic hormone receptor [Anopheles gambiae] |
1e-40 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF13853.1 |
Olfactory receptor |
0.039 |
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
2.9e-15 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000029255 |
| A. aegypti |
AAEL011325 |
| B. mori |
BGIBMGA002767-TA |
| A. aegypti |
AAEL009673 |
| N. vitripennis |
NV16060-PA |
| S. invicta |
SI2.2.0_00261 |
| C. quinquefasciatus |
CPIJ001199 |
| D. melanogaster |
FBgn0025595 |
| H. sapiens |
ENSP00000397561 |
| N. vitripennis |
NV14629-PA |
| H. sapiens |
ENSP00000226413 |
| P. vanderplanki |
Pv.04549 |
| T. castaneum |
TC009772 |
| N. vitripennis |
NV51037-PA |
| A. mellifera |
GB16857-PA |
| D. plexippus |
DPOGS213276PA |
| A. gambiae |
AGAP002156 |
| P. humanus |
PHUM370810-PA |
| D. plexippus |
DPOGS204809PA |
| T. castaneum |
TC001245 |
| A. gambiae |
AGAP001532 |
| H. melpomene |
HMEL011945-PA |
| D. plexippus |
DPOGS210475PA |