MidgeBase gene description page [Pn.12086]
Outline
| Gene ID | Pn.12086 |
| Type | Protein coding gene |
| Scaffold | PnScaf15463 |
| Start | 11592 |
| End | 15346 |
| Direction | + |
Sequence
Transcript: 2934 (bp)
ATGTCCCAAATACTCCGACGCAATTCAAGGATAAATTTTATTTATCGCTCACTTAAACCGGTGGTTATCAATGCTACAAAGCTTAATTATTCAGTGTTAAGCGGTAGAAATCAATGGAATCATTACGGAAACAGCCTGAGATACAAACAAAATGAATTATTTGAAAATTCGCTGCAAAGAAGAAATCCAGTGAGCACGAGAAGTTATGGAATGCTTGTGGGACGGATTTTGAGAGGAGCTCTCAAATTGAGATATTTAGTGCTGGGCGGTGCCGTCGGAGGAACAGTCACGCTCAACAAAAAATATGACCAATGGCGAGAAGGACTTCCCGACATGAAGTGGCTGAACGAAGTCTTTCCCGACAACGATCAATGGCAAAAGTTTTCAAACTCGGTCGTCACTATCACTGAATCCCTCAAGAACTCAATCGAGCTCGATCCACAACTGAAAAAGTTGGGCGAGGACAAACTCGTCGAGTGGAGAAAATGGTTCGACAGTCGGCTAGATAACGCAATCGAAGCCACGGAAATCGAGACACAGCTAGAAAATGCCGAAAGACAATACTCGATGCTGACGAAATTGAATAATTTCCTCGAAGATTTCGGCGCAGACCTCATGCAAAAGTCGACGGTGGTCGCGAAGGAGATGAACTACGAGGAGCACAAACGAAAGAATTTGATCCTTCAGAAGCAAATCGATCAGCTGCAAACGGAAATCATGAATGTCCAAATCAAGTACCAGAAGGAGCTCGAAAAGCTCGAAAAGGAAAATCGCGACCTCCGACAGCAGTATCTGCTCACGAAGTCAAACAGAAAGTTCGTCTCGAAAAAGATCAAAAAGTCACTCATCGACATGTACTCGGAAGTTCTGGACGAGCTCAGCGGCTACGACACGAGTTACTCGACGGCCGACCATTTGCCTCGAGTGGTGGTCGTGGGAGACCAGAGCAGCGGAAAGACATCAGTACTCGAGTCGATCGCACAGGCGCGAATTTTCCCGCGCGGAAGTGGCGAGATGATGACGAGAGCGCCGGTCAAAGTGACGCTGTCCGAGGGTCCGTATCACGTTGCCGCCTTCCGCGACTCGAACCGCGAGTTCGATCTCACCAAGGAGAGCGAACTTGCCGAGTTGAGACGAGAAGTCGAGATAAGGATGAGGAACTCGGTGCGCGGCGGAAAAACCGTCAGCAACGAAGTCATCTCGATGACCGTCAAAGGACCCGGCCTCCAGCGAATGGTGCTCGTCGACCTGCCCGGAATCATTTCGACGCAGACCGTCGACATGGCGGCCGACACAAAGGACTCTATCACGATGATGACGAAGCACTACATGAGCAACCCGAACGCCATAATTCTGTGCATCCAAGACGGCTCGGTCGATGCGGAGCGCTCGGCCGTGACGGACCTGGTGGCCAACTGTGATCCGCTCGGCAAGCGAACGATCTTCGTCATGACGAAGGTCGACATGGCGGAAAACCTCGCCGACCCGGACAGAATTCGCCGCATCCTCAGCGGAAAACTCTTCCCGATGAAGGCCCTCGGCTATTTTGCTGTTGTGACGGGCCGAGGCCGCAAGGACGACTCGATCGAAACCATTCGGGACTACGAGGAGAATTTCTTCAAAAATTCGAAGCTTTTCCAGAGCGGAGTGACCATGTCGCATCAGTGCACGTCGCGCAACTTGAGCCTCGCCGTCGCCGATCGTTTTTGGAAGATGGTGCGCGAGACAATCGAGCAGCAAGCGGACGCCTTCAAGGCCACACGCTTCAACCTCGAGACCGAGTGGAAGAATAATTTCCCGCGAATTCGCGAGTCGGGTCGCGACGAGTTGTACGAGAAGGCGCGCGGCGAAGTCCTTGACGAGGTCGTCAACTTGTCGCAAATCAGCTCGAAAAAGTGGGAGGAGCTGCTGAACAAGAAGCTGTGGGAGAAAATATCAAACTATGTGTTCGAGAACATCTACCTTCCGGCGGCTCAGTCGGGCTCGCAGGGCTCGTTCAACACCATGGTCGACATTAAGTTGCGGCAATGGGCCGAGGAGGTCCTGCCGTCGAAGAGCGTCGAAACCGGCTGGGAAACGCTGCAGGAGGAGTTCGCGACCCTCATCGAAAAGGCCAAAAAGAATCCCGACCACGACGACATCTTCGACAACCTCAAGTCGGCCGTGATTGACGAGGCGATGCGGCGACATTCCTGGGAGGACAAGGCGATGGACATGCTGCGCGTCATTCAGCTGAACACGCTCGAAGACAGAAACGTCCACGACAAGCAGGAGTGGGATCAGGCCGTGAAATTTCTGGAGACGTCGGTCAAGGACAAGCTCCAGCACACGGAACAGACAATTTCCGAGATGTTCGGTCCGAGTGCGACGCAGAGATGGTTGCAGTGGCGGTCGTCGACCGAGGATCAAAAGAAACGTCGCCACGTGAAGGACGAACTGGACAAAATACTGAGCAGTGATAAAAAGCACCCGCCAACGCTTAGTTACGATGAGCTGACGACCATTCGCAAGAATCTGCAGCGCGGTAACATCGAAGTCGAAACAGACTACATTCGAGAAACTTGGTATCCCGTCTATCGAAAGCACTTCCTTCGACATGCACTATCGCGTGCTTACGACCTCCGAAAAGCATATTACTTGTACACGCAGCAAAATGAGAACTTTGAGATAAACTGCAGCGACGTGGTGCTGTTCTGGCGAATTCAACAAGTGATTAAAGTTACATCGAATGCACTGCGCCAGCAAATCATCAATCGCGAAGCGAGACGGGTTGACAAGGAAATTAAAGAAGTTCTAGACGAGTTTGCCGATGACGAAGACAAAAAAGTGCAACTACTGACGGGTAAACGTGTCACTCTCGCCGAGGAACTTATTCGCGTGCGACACATTCAAGAAAAGTTGGAAGAGTTTATTAATGCATTAAACACTGAGAAG
Protein: 978 (aa)
MSQILRRNSRINFIYRSLKPVVINATKLNYSVLSGRNQWNHYGNSLRYKQNELFENSLQRRNPVSTRSYGMLVGRILRGALKLRYLVLGGAVGGTVTLNKKYDQWREGLPDMKWLNEVFPDNDQWQKFSNSVVTITESLKNSIELDPQLKKLGEDKLVEWRKWFDSRLDNAIEATEIETQLENAERQYSMLTKLNNFLEDFGADLMQKSTVVAKEMNYEEHKRKNLILQKQIDQLQTEIMNVQIKYQKELEKLEKENRDLRQQYLLTKSNRKFVSKKIKKSLIDMYSEVLDELSGYDTSYSTADHLPRVVVVGDQSSGKTSVLESIAQARIFPRGSGEMMTRAPVKVTLSEGPYHVAAFRDSNREFDLTKESELAELRREVEIRMRNSVRGGKTVSNEVISMTVKGPGLQRMVLVDLPGIISTQTVDMAADTKDSITMMTKHYMSNPNAIILCIQDGSVDAERSAVTDLVANCDPLGKRTIFVMTKVDMAENLADPDRIRRILSGKLFPMKALGYFAVVTGRGRKDDSIETIRDYEENFFKNSKLFQSGVTMSHQCTSRNLSLAVADRFWKMVRETIEQQADAFKATRFNLETEWKNNFPRIRESGRDELYEKARGEVLDEVVNLSQISSKKWEELLNKKLWEKISNYVFENIYLPAAQSGSQGSFNTMVDIKLRQWAEEVLPSKSVETGWETLQEEFATLIEKAKKNPDHDDIFDNLKSAVIDEAMRRHSWEDKAMDMLRVIQLNTLEDRNVHDKQEWDQAVKFLETSVKDKLQHTEQTISEMFGPSATQRWLQWRSSTEDQKKRRHVKDELDKILSSDKKHPPTLSYDELTTIRKNLQRGNIEVETDYIRETWYPVYRKHFLRHALSRAYDLRKAYYLYTQQNENFEINCSDVVLFWRIQQVIKVTSNALRQQIINREARRVDKEIKEVLDEFADDEDKKVQLLTGKRVTLAEELIRVRHIQEKLEEFINALNTEK
| Type | Start | End | Length |
| CDS |
11592 |
11620 |
29 |
| CDS |
11731 |
12001 |
271 |
| CDS |
12061 |
12196 |
136 |
| CDS |
12262 |
12381 |
120 |
| CDS |
12489 |
12530 |
42 |
| CDS |
12655 |
14611 |
1957 |
| CDS |
14724 |
14835 |
112 |
| CDS |
14899 |
15028 |
130 |
| CDS |
15104 |
15178 |
75 |
| CDS |
15282 |
15343 |
62 |
| intron |
11621 |
11730 |
110 |
| intron |
12002 |
12060 |
59 |
| intron |
12197 |
12261 |
65 |
| intron |
12382 |
12488 |
107 |
| intron |
12531 |
12654 |
124 |
| intron |
14612 |
14723 |
112 |
| intron |
14836 |
14898 |
63 |
| intron |
15029 |
15103 |
75 |
| intron |
15179 |
15281 |
103 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001657306 |
dynamin [Aedes aegypti] gb|EAT44850.1| dynamin [Aedes aegypti] |
0.0 |
| InterPro |
IPR022812 |
Dynamin |
|
| InterPro |
IPR001401 |
Dynamin, GTPase domain |
|
| Gene Ontology(MF) |
GO:0005525 |
GTP binding |
|
| Gene Ontology(MF) |
GO:0003924 |
GTPase activity |
|
| Pfam |
PF01926.18 |
50S ribosome-binding GTPase |
3.1e-05 |
| Pfam |
PF00350.18 |
Dynamin family |
3.8e-38 |
| Pfam |
PF08477.8 |
Miro-like protein |
0.0041 |
| Pfam |
PF03205.9 |
Molybdopterin guanine dinucleotide synthesis protein B |
0.032 |
| Pfam |
PF14282.1 |
FlxA-like protein |
9.9 |
| Pfam |
PF07632.6 |
Protein of unknown function (DUF1593) |
0.0031 |
| Pfam |
PF13191.1 |
AAA ATPase domain |
0.013 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC010420 |
| A. mellifera |
GB17771-PA |
| P. vanderplanki |
Pv.13559 |
| C. quinquefasciatus |
CPIJ001287 |
| A. aegypti |
AAEL003829 |
| H. sapiens |
ENSP00000355324 |
| D. plexippus |
DPOGS211814PA |
| H. sapiens |
ENSP00000354781 |
| H. sapiens |
ENSP00000376233 |
| P. humanus |
PHUM498620-PA |
| N. vitripennis |
NV18146-PC |
| B. mori |
BGIBMGA008154-TA |
| H. sapiens |
ENSP00000354681 |
| A. gambiae |
AGAP011286 |
| H. melpomene |
HMEL004278-PA |
| D. melanogaster |
FBgn0261276 |
| H. sapiens |
ENSP00000354429 |
| N. vitripennis |
NV18146-PA |
| M. musculus |
ENSMUSG00000038084 |
| H. sapiens |
ENSP00000355311 |
| S. invicta |
SI2.2.0_08341 |
| N. vitripennis |
NV18146-PB |