MidgeBase gene description page [Pn.12074]

Outline

Link to gbrowse

Gene ID Pn.12074
Type Protein coding gene
Scaffold PnScaf15449
Start 4217
End 9255
Direction +

Sequence

Transcript: 2388 (bp)

 ATGCCATTAGCTGGAAAAACATTAAATATATGGCCAACAAAACAAGAAGTCGCGAGCACATCTCAGCAATTACAAGGCTTAGAGATGGTCGTCGACGATGGATCTGTCATCAAATATCCACAGAATACGATCAATATTAATATTAATAACAATAACAATAATAACTCAATGGATAAGCTGCAAATTTCTGGACACGACGATGACTCCGACGACGTCGAGATGAAGTCCGATGACCTAGTCGTCGAGGTAAAGGATCTCGTCAAGGACGGTCACGAGAAGGCCGATCCCTCGCAGTTCGAGCTGCTCAAAGTGCTCGGCGAGGGCAGCTTCGGGAAGGTGTTTCTCGTGCGGAAGATTGTCGGCCTCGACGCCGGAACGTTGTACGCCATGAAGGTGCTGAAGAAGGCAACTCTCAAAGTCAAGGACCGCATGCGGTCGACCAACGAGCGGAACATCCTCGCCGACATCGCGGTGGGACACTCGTTTATCGTGAAGCTTCACTACGCCTTTCAAACGCCCGGCAAACTCTATCTCATTCTTGACTTCCTACGCGGCGGTGATTTGTTCACGCGATTGAGCAAGGAGGTCATGTTTACAGAGGAGGATGTCAAGTTTTACCTCGCCGAGCTTGCACTCGCTTTAAATCATCTTCACTCACTCGGAATTATTTATAGAGATTTAAAGCCGGAGAATATTCTACTGGACGCCGACGGTCACATTGCGCTGACGGACTTTGGGCTGTCGAAAATTCCGCTCGGAGACTCAAAAACCTACAGCTTCTGCGGAACAGTCGAATATATGGCGCCCGAAGTTGTCAATCGAAAAGGTCATACCTTCGCTGCAGATTGGTGGAGCTTCGGAGTGCTTATGTATGAGATGCTCACAGGAAATCTGCCGTTCCACGGAACAAACAGACAGGACACGATGAATCAAATTTTGAAGACAAAATTGGGCATGCCAGAGAACCTGTCGCCCGAGGCTCAGTCACTGCTGCGCGCTCTCTTCAAGAGAAATCCCCAGAACCGGCTCGGCGCCGGCTCGAATGGCATCGAGGACATTAAGCGGCACGAGTTCTTCGCGACAATCGATTGGGACGCGCTGCTGGCGAAGAAAGTGCGAGCGCCGTTCATCCCCAGTGTTTCGCGTGCCGACGACACATTCTACTTCGACTCGGACTACACGACACGCGATCCGCACGACTCGCCCAGCGTGCCGGTGTCGGCGAGTGCCCACGAAATTTTCCGAGGATTCTCCTTCGTCGCGCCGTGCCTGCTTGACGAGGGCGAAGACGAGGCCGGTGCCATGAACGTCAACAACAACGAGCGACAGTCGTCATTCCAGTCTTATGAAATTCCCGGCGTTCAGCCACATTCCATACACGACGAGTACCAGCTGAAGGAGGTCCTCGGCAGGGGCACGTTCTCGGTGTGTAAGCTTTGCGAGCACAAGACGACGAAGAAACAATATGCCGTGAAAATTATCGACAAATCGCGTCACGATTGCAGGGAGGAGGTTGATATTCTGCTGAGATACGGCAACCATCCGAACATCGTTACGCTCTATCGTGTCTTTGAGGATCCGCCATCTCGCTCCGTGTACTTAATTATGGAATATTTAAAAGGAGGAGAATTGCTCGATCGAATTTTGTCAATACAGTTTAGTGAGCAGGAGTCTGCAGCTGTCCTCAAGACTGTCGTCTCTGCCGTCTCATATCTCCATGACCACGGTGTCGTTCACAGGGATTTAAAGCCGTCAAACCTTCTCTATGCTTCCATTAATCATACGCCCGACTCGTTGCGACTGTGTGATCTGGGCTTCGCAAAGCAGCTGAGAGCCGACAACGGTCTACTGATGACTCCGTGCTACACGGCCAACTTCGTGGCGCCCGAGGTGCTGAAGAGGCAGGGCTACGATCAACTTTGTGATATCTGGTCATTGGGCGTCCTTCTCTACATCACGCTGAGTGGTCGCACGCCTTTCGCAAGCACGCCCAACGACGAGCCCGAAACGATCCTCAAGCGAATCGGAAGCGGTCAGATTGACTTGGAGAACGGCCGCTGGGCGTCGATTTCGATCGAGGCGAAGGAATTGATAAGTCACATGATGCACATCGTTCCATCGAAGCGTCCGACGGCGGCGCAAATCCTCAGACATCAGTGGACCGTGCGACAGTCGCACGCCTTCGAGTTGCGGTCGCAGCAAACGTCGTCACACTCGCTGCACCATGTGATGCAAAAGCCCACGACAAAGGACATCATCGAGATAAAGGGAGCTGTAAATGCGACATTCCGAGCGATAAACTCGCCGCAGGCCATGAACATCGTCGGCCCCGTCACCATGAGCGAGCTGGCACGTCGACGAAGACGAGGCGCCGAGAAAGGGCACAAC 

Protein: 796 (aa)

 MPLAGKTLNIWPTKQEVASTSQQLQGLEMVVDDGSVIKYPQNTINININNNNNNNSMDKLQISGHDDDSDDVEMKSDDLVVEVKDLVKDGHEKADPSQFELLKVLGEGSFGKVFLVRKIVGLDAGTLYAMKVLKKATLKVKDRMRSTNERNILADIAVGHSFIVKLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALNHLHSLGIIYRDLKPENILLDADGHIALTDFGLSKIPLGDSKTYSFCGTVEYMAPEVVNRKGHTFAADWWSFGVLMYEMLTGNLPFHGTNRQDTMNQILKTKLGMPENLSPEAQSLLRALFKRNPQNRLGAGSNGIEDIKRHEFFATIDWDALLAKKVRAPFIPSVSRADDTFYFDSDYTTRDPHDSPSVPVSASAHEIFRGFSFVAPCLLDEGEDEAGAMNVNNNERQSSFQSYEIPGVQPHSIHDEYQLKEVLGRGTFSVCKLCEHKTTKKQYAVKIIDKSRHDCREEVDILLRYGNHPNIVTLYRVFEDPPSRSVYLIMEYLKGGELLDRILSIQFSEQESAAVLKTVVSAVSYLHDHGVVHRDLKPSNLLYASINHTPDSLRLCDLGFAKQLRADNGLLMTPCYTANFVAPEVLKRQGYDQLCDIWSLGVLLYITLSGRTPFASTPNDEPETILKRIGSGQIDLENGRWASISIEAKELISHMMHIVPSKRPTAAQILRHQWTVRQSHAFELRSQQTSSHSLHHVMQKPTTKDIIEIKGAVNATFRAINSPQAMNIVGPVTMSELARRRRRGAEKGHN 
Type Start End Length
CDS 4217 4270 54
CDS 6402 7050 649
CDS 7153 7319 167
CDS 7414 8055 642
CDS 8144 8252 109
CDS 8344 8461 118
CDS 8542 8857 316
CDS 8920 9252 333
intron 4271 6401 2131
intron 7051 7152 102
intron 7320 7413 94
intron 8056 8143 88
intron 8253 8343 91
intron 8462 8541 80
intron 8858 8919 62

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_311835 AGAP003040-PA [Anopheles gambiae str. PEST] gb|EAA07892.5| AGAP003040-PA [Anopheles gambiae str. PEST] 0.0
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR002290 Serine/threonine- / dual-specificity protein kinase, catalytic domain
InterPro IPR017892 Protein kinase, C-terminal
InterPro IPR011009 Protein kinase-like domain
InterPro IPR000961 AGC-kinase, C-terminal
InterPro IPR008271 Serine/threonine-protein kinase, active site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR020635 Tyrosine-protein kinase, catalytic domain
Gene Ontology(BP) GO:0006468 protein phosphorylation
Gene Ontology(MF) GO:0004713 protein tyrosine kinase activity
Gene Ontology(MF) GO:0004674 protein serine/threonine kinase activity
Gene Ontology(MF) GO:0005524 ATP binding
Gene Ontology(MF) GO:0004672 protein kinase activity
Gene Ontology(MF) GO:0016772 transferase activity, transferring phosphorus-containing groups
Pfam PF00069.20 Protein kinase domain 1.1e-138
Pfam PF06293.9 Lipopolysaccharide kinase (Kdo/WaaP) family 1.5e-08
Pfam PF10707.4 PhoP regulatory network protein YrbL 1.6e-05
Pfam PF01163.17 RIO1 family 0.0024
Pfam PF01636.18 Phosphotransferase enzyme family 5.1e-08
Pfam PF00433.19 Protein kinase C terminal domain 9.3e-07
Pfam PF07714.12 Protein tyrosine kinase 1.5e-71

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID
Pn.13912

Orthologous genes

Species Gene ID
D. melanogaster FBgn0262866
H. sapiens ENSP00000432945
H. sapiens ENSP00000363281
H. sapiens ENSP00000262752
M. musculus ENSMUSG00000003644
H. sapiens ENSP00000368884
A. mellifera GB13245-PA
A. gambiae AGAP003040
H. sapiens ENSP00000427015
N. vitripennis NV11974-PA
H. melpomene HMEL015753-PA
H. sapiens ENSP00000422435
H. melpomene HMEL011296-PA
S. invicta SI2.2.0_12747
H. sapiens ENSP00000333896
C. quinquefasciatus CPIJ011936
H. sapiens ENSP00000440830
D. melanogaster FBgn0020412
P. vanderplanki Pv.13045
A. gambiae AGAP006094
H. sapiens ENSP00000440220
M. musculus ENSMUSG00000021180
H. sapiens ENSP00000294261
H. sapiens ENSP00000265678
P. vanderplanki Pv.07625
P. humanus PHUM599900-PA
H. sapiens ENSP00000368865
M. musculus ENSMUSG00000025665
P. humanus PHUM508900-PA
C. quinquefasciatus CPIJ012176
M. musculus ENSMUSG00000023809
C. quinquefasciatus CPIJ014359
H. sapiens ENSP00000363277
N. vitripennis NV16126-PA
H. sapiens ENSP00000442803
A. aegypti AAEL004474
H. sapiens ENSP00000363283
H. sapiens ENSP00000431651
D. plexippus DPOGS205511PA
M. musculus ENSMUSG00000024952
D. plexippus DPOGS203202PA
H. sapiens ENSP00000432281
T. castaneum TC001074
H. sapiens ENSP00000402787
H. sapiens ENSP00000386050
H. sapiens ENSP00000422484
A. mellifera GB12043-PA
H. sapiens ENSP00000444837
H. sapiens ENSP00000435412
H. sapiens ENSP00000435580
T. castaneum TC000021
A. aegypti AAEL011145
B. mori BGIBMGA011088-TA
H. sapiens ENSP00000261991