MidgeBase gene description page [Pn.12043]
Outline
| Gene ID | Pn.12043 |
| Type | Protein coding gene |
| Scaffold | PnScaf15339 |
| Start | 12345 |
| End | 14237 |
| Direction | - |
Sequence
Transcript: 777 (bp)
ATGCACACGGTGAACGACATTCGAGTGGCGCTGCAGAAGTTCGGCTGGCCCGACTACGGCGTCTTCCTGCTGATGCTCTCGATCTGCGCCCTCATCGGCATCTATTTCGGCTTCATCGAGAAGAAGCCGAAGGGCGCGTGCGATGACGAGGCGGACTACTTGGTCGGCGGCCGTCGGATGAAAACGCTTCCCGTTGCCATGTCATTAATCGCGAGCTACATCTCGGGCATTAGTCTTCTCGGCATCCCGACTGAGATCTACATTTATGGAATCTCATACTTCTACATAATGGGAGGAATTATCATCACGGGATTCGTAATGATGTCCGTCTATCTTCCCGTCTTTCACGATCTCAAACTCACAAGCACATATGAGTACCTCCAGACGCGTTTCGATAGAAAAGTGCGCTTATTCGGCTGCATTCTCTTCGTCGTCTCGCAGATTGTGTGGCTGCCCATCGTTATATTTGTCCCCGCATTAGCGTTCAATCAAGTGTCTGGGATCGATATTCACTTGATAACGCCGATAACCTGCGTGTGCTGCATCTTCTACACGTGCGTCGGTGGAATGAAAGCGGTAATTTATACCGATGTCGTACAATCGCTAATGATGTTTGGAGCGATGCTGTTAGTCATTATTAAAGGCACTTACGATATAGGCGGATTGGATGTTGTGATTACGCGCAACGTCGAGAGTGGACGCATCGAGGCACCGAACACGTCGTTTGACTTGACGGAGCGTCACACCATTTGGTCGTTGGTATCGACAGCTTTTTAC
Protein: 259 (aa)
MHTVNDIRVALQKFGWPDYGVFLLMLSICALIGIYFGFIEKKPKGACDDEADYLVGGRRMKTLPVAMSLIASYISGISLLGIPTEIYIYGISYFYIMGGIIITGFVMMSVYLPVFHDLKLTSTYEYLQTRFDRKVRLFGCILFVVSQIVWLPIVIFVPALAFNQVSGIDIHLITPITCVCCIFYTCVGGMKAVIYTDVVQSLMMFGAMLLVIIKGTYDIGGLDVVITRNVESGRIEAPNTSFDLTERHTIWSLVSTAFY
| Type | Start | End | Length |
| CDS |
12348 |
12408 |
61 |
| CDS |
12544 |
12697 |
154 |
| CDS |
12764 |
12832 |
69 |
| CDS |
12908 |
12959 |
52 |
| CDS |
13275 |
13340 |
66 |
| CDS |
13755 |
13914 |
160 |
| CDS |
14023 |
14237 |
215 |
| intron |
12409 |
12543 |
135 |
| intron |
12698 |
12763 |
66 |
| intron |
12833 |
12907 |
75 |
| intron |
12960 |
13274 |
315 |
| intron |
13341 |
13754 |
414 |
| intron |
13915 |
14022 |
108 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651974 |
sodium/solute symporter [Aedes aegypti] gb|EAT41908.1| sodium/solute symporter [Aedes aegypti] |
1e-96 |
| InterPro |
IPR001734 |
Sodium/solute symporter |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF00474.12 |
Sodium:solute symporter family |
5.7e-26 |
| Pfam |
PF01146.12 |
Caveolin |
4.5 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_02680 |