MidgeBase gene description page [Pn.12042]
Outline
| Gene ID | Pn.12042 |
| Type | Protein coding gene |
| Scaffold | PnScaf15339 |
| Start | 10515 |
| End | 12083 |
| Direction | - |
Sequence
Transcript: 1062 (bp)
ATGTTTTACGTCAAACACACACAAAAAAAACCCGCTCAGTGCATTGGAGGCTTCGTGAACTGGCTAAAAGCGAATGCAATCAGTCAAAATATGATTCAGCGATATTTATCGTTGCCAAATTTAGCGGCAGCCAAAAGAGCGCTCTGGATCTTCATTTCGGGCGTTTTCGTGCTGCTTGCCATTTGCTGCTACTGCGGTCTGCTGATTTACGCAACCTACTTCGAGTGCGACCCGCTCGCGACGAAACTGGCGAAGGCGAAGGATCAGCTGTTGCCGCTGCTGGTGATGGAGCTGTTGGGCAGTTATCCGGGTCTGGTGGGAATGTTTGTGGCGGGCGTTTTTTCGGCCGCCCTCTCGTCGCTCTCGACAGGCCTCAACAGCATGTCGGCGGTGATTCTGGAGGACTTCTTCAAGCCATACGCGCGCAAGCCGCTGACGGAGCGACAAACCAAGTACATCATGCGTTGCGTCGTGCTGATTTTCGGCGGCATCTGTGTGGCACTGGTGTACGTGGTCGAGCATCTCGGCCCCGTTCTGATGCTCTCCGTGTCGCTCGGAAGCATCGTGCAGGGACCGTTACTGGGCATTTTTACATGCGGCATAATGTTTCCATGGGTCACCGGCACCGGCGCTCTAGTGGGCAGCGCAACAGCTCTATCATTCATGACGTGGCTCTGCATTAGCGCCCAGCGTGCGATCTCGACGGGCGAGCTGAGCTTCGATACGAAGCCAGTGACCACAAGCGGCTGCACTTATAGCTTCGCCTTCGACGACGCCCGGAACGAGACGACGGTGGCACCGACAGTCACGGCGGCCAGTGGCTTTCGAATCCATCACATCTCCTACATATGGTACACGCTCGTCGGCTGCGCAATTTGCATCATTGTGTCGCTAATTATGTCATATTTCACGGGGCCTAATAATCCCGCCGACATGAATCCGAATTTGCTTGCGCCATTTGTGCGCAAATTAATCAAAGCCAAAGAGTCGACGACAACGGCGGCTCGTTCGAAGCACTCTGCGCTGGCAAATTGCGCCCGCGACGACGATGAAAGTCACTTT
Protein: 354 (aa)
MFYVKHTQKKPAQCIGGFVNWLKANAISQNMIQRYLSLPNLAAAKRALWIFISGVFVLLAICCYCGLLIYATYFECDPLATKLAKAKDQLLPLLVMELLGSYPGLVGMFVAGVFSAALSSLSTGLNSMSAVILEDFFKPYARKPLTERQTKYIMRCVVLIFGGICVALVYVVEHLGPVLMLSVSLGSIVQGPLLGIFTCGIMFPWVTGTGALVGSATALSFMTWLCISAQRAISTGELSFDTKPVTTSGCTYSFAFDDARNETTVAPTVTAASGFRIHHISYIWYTLVGCAICIIVSLIMSYFTGPNNPADMNPNLLAPFVRKLIKAKESTTTAARSKHSALANCARDDDESHF
| Type | Start | End | Length |
| CDS |
10518 |
10952 |
435 |
| CDS |
11246 |
11735 |
490 |
| CDS |
11947 |
12083 |
137 |
| intron |
10953 |
11245 |
293 |
| intron |
11736 |
11946 |
211 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_321973 |
AGAP001185-PA [Anopheles gambiae str. PEST] gb|EAA00957.5| AGAP001185-PA [Anopheles gambiae str. PEST] |
1e-113 |
| InterPro |
IPR001734 |
Sodium/solute symporter |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF11044.3 |
Plectrovirus spv1-c74 ORF 12 transmembrane protein |
0.45 |
| Pfam |
PF00474.12 |
Sodium:solute symporter family |
1.7e-17 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.12792 |