MidgeBase gene description page [Pn.12015]
Outline
| Gene ID | Pn.12015 |
| Type | Protein coding gene |
| Scaffold | PnScaf15238 |
| Start | 35995 |
| End | 46444 |
| Direction | - |
Sequence
Transcript: 5697 (bp)
ATGGATCAGTCGCACATGTCGGACCACTCGTCGGCGCAGTCGTCGCCCATCCACATGCAGAAGATGCAGTTCAAGCTGCAGCAGAGGCTGGCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATGTCGCCGATGATGGACAGACGGAAGATGGGCGCGAAGGCCGCGTCCGCGCTCGATCTCTCCAACGGCCAGCCCGCCTCCATGGACGCGCAGCTCCTCTCGCACCTCCAGCACCAGCAGCAACAACAACAACAGCAGCACTCGCTGATGCTGCACCAGCAGCAGAAGTTCCCGCACCAGAACCACCCGATCGAGCAGCAGATGTACCAGCAGTTCCACCAGCACAAGCCGATGATCACGCAGCTGATGAAGGTGCAGGGCAACAACGCGTCGCTCGCCGACTTCCGCTCGATCGTGCACGGCGCGGCCGGCGGCAGCGCCGCCCAGGTGGCCGACCTCATCGCGAGCAAGGAGCAGCTGAACGCGATCGTGAACGCGCAAAAGCACTCGGACTACATCGTCGAGGACTACATGGACAAGATCCAGACGCGCATCGCGCTGCTCGAGACGGAGCTGAAGTTCGCCGACCGCAAGCTGCACGTGCTGTACGGCGAGTACAACGACATGCTCGCCAAGATCGACAAGCTCGAGAACCTCACGATCGCGCAGCAGTCCGTGCTCGCCAACCTCCTCGACCTGTGCAGCAACCAGTCGCACGAGGTGCACGCGGCGAAGGCGATCCAGGCGAAGGCGGCGCAGCTGTTCGGCGTCGACCCGCGCGCGCTCCTCACGATGGGCGCGGCCGAGGCGGCGTTCGAGGGCGAGGCGGCGTTCCCGAGCGAGGCGCTCGACTCGACGGCCGCCGAGTTCAGCGAGCTGCTCGAGGACCTCAAGAACGACGCCATCATCGATGGGCTGCGCGGGCAGCAGCTGCAGCAGTTCGCCGCCGACTACCAGGGCGACGCCGACTACGAGGCGCTCATCGAGCTGCTCGGCAAGCAGATGAAGCTGCCGCCCGCCGACGCCGCCTTCTCGTTCTTCGGGCGCGGCGAGCAGGCCGAGGAGTTCCTCAAGGCGCAGGACGAGATGAAGCAGCACGCGCTGCAGCAGCAGCAGCACAACAGCAGCATGGAGCTGCTCAAGAACCTCGCCGACGGCCAGCTCAAGATGGAGATGGAGTTTTTTCGCAGCGGCGAGATCAACAAGAGCCTCTTCGAGACGCTCCAGGCGAGCGTCCAGCCGACGACCGCGCCGCCCACAGCCGCCACCGCCGCCGCCGCCACCCTCGACATGATCTACGAGGACAATGAGGAGCGCGCCAACGAAAACGGCGGCGCCGGCGGCGGCGTGAGGGAGGCGGACGCGAAGGCGCACGAGTCGTCGGCGGAGGAGAAGTCGTCGGGGTCGCGCAAGCCCAAGTCGAAGAAGAAGAAGCACCACCAGCTGCAGCTGCAGCAGCAGCAGTTCCAGCTGCAGAGCGACGACCAGCTGGTGCACGAGATCATCGAGGAGATCCTGCGGCTCGAGAGCCTCACGCACCTGCTCAGCAAGAACCAGCACGACGAGCTGAAGGCGCTCGTGAAGGGCGAGATCAAGGTGCTGCAGAGCATGCGCAAGCTCGACCTCAACTTCGTCGCGCTCCTCGTCAGCCCGACGGCGCAGCTCGCCTCGCCCTCCGCGCCCAGCTCCATGAGCCTCGAGGAGGAGGACCAGAAGTTCGACGCGCTCATGCGCAAGCTGCGCCGGAACCTCGACGCGCTGCGCACGATCGAGCCGACGGCGAGCGAGCCGACCAGCTCCAAGGCCGCGCTCTACAACGACGACGAGTACTTGCAGTCGCTACGCAAGTCCCTCGACCGCCACAACTCCATGCAACTCCTCCTGCAGCTGCAGAACCCCAACCTCAACTCCTCCTTGTCCTCCGCTGGCGGCGGCGGCGGCGGCGTCGGCTCCAAAATCAACGCCGGCGATTTTTTATCCGACGATCAGCTGGACGGCGGCGAGAGCAGCAGCCCGCCGCCGCCCGCACCCAACGGCGACCTCTACTACCCGAGCGGCGAGGACGAGCGGTTCGCGATGACGGCGATGGCGACGGCCGCGGAGCAGCAGGAGTGGAACCCCTTCCACGTCGACATCCTCATGATGAAGCAGCAGCAGCAGAGCCAGCCGCGCCAGCTGTCGCCCTACCGGCGCAACACGTCGCCCAAGAAGAGCGACTCGGGCCTGAGCTCCATGTCGGGGTTCTCGAGCTTTGAGAAGTCGCCCAACTCGCCGTCGTACTCGCTGCCCTACGATGGGGCCAGTGGTGGCGGCGGCGGTTGTGGGGGGAGCTACCGGGCGGCGACCATCCGCTCGCAGGACTACGTGAAAATGCTCAACACCTACCAGCAGCTTAAGGTGTCGTCGGCCGCCTCGCACGAGGCTGCTGTTGCCGGTGGTGGTGGTGGGATTGCGAATGTGAGTGCTGCTTTTCAAGAGCCCCAGTCGTCGGTGTCGCCCTTTCTCTTCTCCGACGTTCCCAGCAGCGGCAGCGCCCTCCTACAACAACAACAGCAGCAGCAGCAGCAACAACAAAGTCAGCAGCAAGGGCAGCTGGCGCCGCCGGAGGGCATCTACGGCGAGGAGAACCTGAACTACATAAAGGAGCTGTCGCAGAACGTGCCGATCTGCTCGATCTACGAGAACAAGTCGATTTTTGACAACGTGAGCGTCATCAAGCCAGCCTCAGCGTGGGAGATGTACGTGAAGAACCAGAGCGCTGAGACGTCGGCCGGCGGCCAGCCGGTGCCCTACCCGGACCTCCTCAACGTGAGCCAGGAGGCGAGCGGCGAGGCGCTGAAGAGCCTGCAGCAGCAGCAGCAGCTCGAGGAGCTGATGGAGCAGCGGCGCAAGCTCGACGCCCAGAAGCAGCAGCTCAAGCAGGAGCAGCAGCTGCTCATGCAGCGCAAGCTGCAGAAGCGCTCGCAGAACCTCACCGACCACCTCGTGTACTACCCCTCGCAGCCCTCCAACGACTACCAGCGCGACTACCATCCGCAGCACCACCAGAACCTCCAGCACGACGAGTTCATGCAGCACGCGCACGCCCAGCACCAGGTGCACCTGCAGCGCCAGATGCGTCTCACTGAGGAGGGAAAAAACGGCGGCGTCGCCGTCGGAGGAGCGGGCCCTGAAGGTGGGAGCGGTAGCGGGGGCAGCCATGGAGGGAGGGGCGACAAGAAGCGGCACGCGTACTTGAACAAGAGCCTCAACAAGGTGCAGAACTGGCTGCCCGAGATCAAGCTCAAGAAGATGTCGAAGCGCCACCGCAGCCACAGCCTCCCCGGGCAGGTCGACAGCGACGACGTGTACGAGCCGCAGCACTACAAGATGAACCTGAAGAAGGGCGGCGGCGGCGGCGGGGGCGGAGGTGGCGGCAGCGGCGCGAGGGGCGACAAGAAGCAGGGCGAGGTGTACGTGATGAAGAGCTACATGAAGGGCAAGAAGAAGGACCTCGTGCGCACGATGTCGTCGATCATGCACAAGGCGCAGAAGACCTACCGCCGGCACAGCTTCTCGCACCACCACCTCTCGGACGAGGAGGGCGGCGGCGGCGGCGGCGGGGGCGAGGAGCGCTCGCCGCAGTTCCAGCGTGTGCGCGGCGCGCGCAGCATGTCGTCGGCGGCGACGGCGAGCAAAAGCCGCGCCTACTCGGACACGGAGACGGACATCAGCTCGATGTTCAGCGACAGCGAGGAGCACTCGATGCCGCCCATTTTCGCGACCGTCGGCGATTCAAAGTCAAAACATTCTGATGCTGGTGATTCAGACCGAAATGCTGTGAGCGACTCGTCCAACGGCAGCCGCCAGCAGCACGCGTCCGAGCAGCAGCCGCAGTCGCAGGACAACAATTTCAACCTGAACTTCACCAGCACCAGCATGGAGTTTGCAGCGAGTCGCAAGGTCGGCATTTTCCGCAAGAAGTCGTCCACGAACGACGACTTGGGCGGGAGCTGTGGCGGCGGCGGCGGCAGTGCCAGCGACTCGCACAGTCCCACCAACAACGAGTCCGTCAACGACATCTTCGAGCGCACGAAGGCGGCGCAGCCGGCGGCAACGGCGACGGCGACGGCGCAAAAGCTCACCAAAACCCACTCGATTTTCGTCGACTCCATCGACGACGACGGCGAGGTGCGCGCGAAGCCGGTGGCGGCGCCGCGCAACGAGAGCCTCGACCCTTCACCGGCGACGGCTGTCACGGCGGCTCCGACGCGCCCGGTGCCGAGCCCGCGCTTCGAGCACTCGCGCTCGAACAGCATCAAGAACAGCCTGGACGTGCCGGGCGGCGGCGGCGGCAAGGAGGAGGAGGACAGCCGCTCGCAGCACTCGTTCCGCACGTCGATCTCGAGCCGGCGGCAGAGCACGGAGGACTCGATCGACACCGACGACGAGTACTTCTACTACGAGATGCGCAACCTCGAGGAGCTCGAGCGCAACAGCCACATGGAGTCGCTGCTGCAGGACAACAAGAGCGAGCTCATCAACAACATCATCCGGCTGGAGAGCTCCACGAACGCCGTCGAGCCGGACGACTGCGTGCGCCGCAACATGGCGACCGTGCTGCACGAGCTGCGCGAGACCGTGCGCCTCCGCGAGCCCTTCGACCAGGTCGCGCAGGACGCGCTCAACAACAACAACAACAAACAAAATGGCCGCCACAGGAAGGGCATCTACGACAAGTTCACGCTGGCGTCGACGAACGTCGCCGACCTGCCGTGGAACCGCGACAGCGACGACGACTACAACGAGGACGACGAGCTGATGACGCAGCTGACGCAGTTCGAGTCGGAGATCCGCGACGCGAGCTACGGCAAGGTGAAGAAGAAACGGAAAAAGCCGAAGCGCGCCGAGCGCCACGCCGCCGGCCAGTCGTCGTCGTCGTCGTCGAGTGCGGACGAGGAGCACGGAGGCGACGGCGGCGGCGACGTCGACGAGATGGCGGCGCCCAAGTACGAGCGGCCGCACTCGCAGTCGTCGGGCGTGACGTCCGGGCCGGACTCGCCGATCGCGAGTGACGGCGAGGCGGAGGAGGACGAGGCGGGGGCGCCGCGCGAGCGCTACGACGAGTTCAAGCAGAGGCAAAAAAATGAGCGGCTCCTCGAGCATCCACAGCAGCCGCTTCAACATCCGAGCGATGATCGAGGAGCGAACCGCGACGAAGGACGCACGCCGTCCGGTAGTGCTGCTGCCGAGACGGAACTAAACACACACGACAAACAACAACAACAGCAGGTCCAGGAGGGGGAGGCGCGCAAGGCGTCGCCGATGAGGAAACTCATGCAGCTGTCGTCGACGGTGTCGAGCGACTCGACCAACCAGGACAGCGGCATCAGCGACACGAGCGGCGGCGCCGGCGGCATGAACAGCAAGTGGAAGCTGCTGAAGACGCTGAAGGAGCGCAAGGAGATGAACAATCAAGTGAAGATCAAGGAGGAGGAGGAGAGCACCGCCAAGGAGGGAAAGACGGGCGGCGGCGATGGAGTGCGTGGCAATCACTCAAACGACAATCCATTCTACAGCAACATTGACAGCATGCCCGACATTCGGCCGCGCAGAAAATCAATTCCGCTCGTGTCGGAGCTGGGTTGGTATTCGAATGCCTACCCGAGCAACAACAGCAGCCAATTGGCATACTTTGAGTATGCCACAGGTTTT
Protein: 1899 (aa)
MDQSHMSDHSSAQSSPIHMQKMQFKLQQRLAEQQQQQQQQQMSPMMDRRKMGAKAASALDLSNGQPASMDAQLLSHLQHQQQQQQQQHSLMLHQQQKFPHQNHPIEQQMYQQFHQHKPMITQLMKVQGNNASLADFRSIVHGAAGGSAAQVADLIASKEQLNAIVNAQKHSDYIVEDYMDKIQTRIALLETELKFADRKLHVLYGEYNDMLAKIDKLENLTIAQQSVLANLLDLCSNQSHEVHAAKAIQAKAAQLFGVDPRALLTMGAAEAAFEGEAAFPSEALDSTAAEFSELLEDLKNDAIIDGLRGQQLQQFAADYQGDADYEALIELLGKQMKLPPADAAFSFFGRGEQAEEFLKAQDEMKQHALQQQQHNSSMELLKNLADGQLKMEMEFFRSGEINKSLFETLQASVQPTTAPPTAATAAAATLDMIYEDNEERANENGGAGGGVREADAKAHESSAEEKSSGSRKPKSKKKKHHQLQLQQQQFQLQSDDQLVHEIIEEILRLESLTHLLSKNQHDELKALVKGEIKVLQSMRKLDLNFVALLVSPTAQLASPSAPSSMSLEEEDQKFDALMRKLRRNLDALRTIEPTASEPTSSKAALYNDDEYLQSLRKSLDRHNSMQLLLQLQNPNLNSSLSSAGGGGGGVGSKINAGDFLSDDQLDGGESSSPPPPAPNGDLYYPSGEDERFAMTAMATAAEQQEWNPFHVDILMMKQQQQSQPRQLSPYRRNTSPKKSDSGLSSMSGFSSFEKSPNSPSYSLPYDGASGGGGGCGGSYRAATIRSQDYVKMLNTYQQLKVSSAASHEAAVAGGGGGIANVSAAFQEPQSSVSPFLFSDVPSSGSALLQQQQQQQQQQQSQQQGQLAPPEGIYGEENLNYIKELSQNVPICSIYENKSIFDNVSVIKPASAWEMYVKNQSAETSAGGQPVPYPDLLNVSQEASGEALKSLQQQQQLEELMEQRRKLDAQKQQLKQEQQLLMQRKLQKRSQNLTDHLVYYPSQPSNDYQRDYHPQHHQNLQHDEFMQHAHAQHQVHLQRQMRLTEEGKNGGVAVGGAGPEGGSGSGGSHGGRGDKKRHAYLNKSLNKVQNWLPEIKLKKMSKRHRSHSLPGQVDSDDVYEPQHYKMNLKKGGGGGGGGGGGSGARGDKKQGEVYVMKSYMKGKKKDLVRTMSSIMHKAQKTYRRHSFSHHHLSDEEGGGGGGGGEERSPQFQRVRGARSMSSAATASKSRAYSDTETDISSMFSDSEEHSMPPIFATVGDSKSKHSDAGDSDRNAVSDSSNGSRQQHASEQQPQSQDNNFNLNFTSTSMEFAASRKVGIFRKKSSTNDDLGGSCGGGGGSASDSHSPTNNESVNDIFERTKAAQPAATATATAQKLTKTHSIFVDSIDDDGEVRAKPVAAPRNESLDPSPATAVTAAPTRPVPSPRFEHSRSNSIKNSLDVPGGGGGKEEEDSRSQHSFRTSISSRRQSTEDSIDTDDEYFYYEMRNLEELERNSHMESLLQDNKSELINNIIRLESSTNAVEPDDCVRRNMATVLHELRETVRLREPFDQVAQDALNNNNNKQNGRHRKGIYDKFTLASTNVADLPWNRDSDDDYNEDDELMTQLTQFESEIRDASYGKVKKKRKKPKRAERHAAGQSSSSSSSADEEHGGDGGGDVDEMAAPKYERPHSQSSGVTSGPDSPIASDGEAEEDEAGAPRERYDEFKQRQKNERLLEHPQQPLQHPSDDRGANRDEGRTPSGSAAAETELNTHDKQQQQQVQEGEARKASPMRKLMQLSSTVSSDSTNQDSGISDTSGGAGGMNSKWKLLKTLKERKEMNNQVKIKEEEESTAKEGKTGGGDGVRGNHSNDNPFYSNIDSMPDIRPRRKSIPLVSELGWYSNAYPSNNSSQLAYFEYATGF
| Type | Start | End | Length |
| CDS |
35998 |
36069 |
72 |
| CDS |
36401 |
36517 |
117 |
| CDS |
40489 |
43526 |
3038 |
| CDS |
43975 |
46444 |
2470 |
| intron |
36070 |
36400 |
331 |
| intron |
36518 |
40488 |
3971 |
| intron |
43527 |
43974 |
448 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002099624 |
GE14499 [Drosophila yakuba] gb|EDW99336.1| GE14499 [Drosophila yakuba] |
4e-40 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM432180-PA |
| H. sapiens |
ENSP00000442569 |
| A. gambiae |
AGAP000065 |
| H. sapiens |
ENSP00000367757 |
| H. sapiens |
ENSP00000438156 |
| D. melanogaster |
FBgn0025726 |
| S. invicta |
SI2.2.0_02136 |
| H. sapiens |
ENSP00000447572 |
| N. vitripennis |
NV21516-PA |
| S. invicta |
SI2.2.0_10367 |
| H. sapiens |
ENSP00000252773 |
| D. plexippus |
DPOGS204827PA |
| P. humanus |
PHUM401000-PA |
| N. vitripennis |
NV30665-PA |
| M. musculus |
ENSMUSG00000062151 |
| H. melpomene |
HMEL014388-PA |
| H. sapiens |
ENSP00000446831 |
| H. sapiens |
ENSP00000380006 |
| C. quinquefasciatus |
CPIJ006394 |
| H. sapiens |
ENSP00000429562 |
| T. castaneum |
TC004071 |
| A. mellifera |
GB12196-PA |
| A. aegypti |
AAEL002357 |
| P. vanderplanki |
Pv.06447 |
| H. sapiens |
ENSP00000367756 |
| S. invicta |
SI2.2.0_11730 |
| H. sapiens |
ENSP00000447236 |
| B. mori |
BGIBMGA001566-TA |
| H. sapiens |
ENSP00000260323 |
| H. sapiens |
ENSP00000400409 |
| D. plexippus |
DPOGS204826PA |