MidgeBase gene description page [Pn.11891]
Outline
| Gene ID | Pn.11891 |
| Type | Protein coding gene |
| Scaffold | PnScaf14817 |
| Start | 3368 |
| End | 5619 |
| Direction | + |
Sequence
Transcript: 1875 (bp)
ATGGAAGCATTTACCTTCAATTATGCCTCGCATCGTCTCAGCGGTCATTTGGGCTCTAAGAATGCTGAAGGTCCGGCGTGCGGTGCAGCCTCATGCGCTAATTGCACGCGTTTGCCTAACGAGTGCTCGACCGCAGAGTTGGCAGCTGCTTTTGTCAAGTATTTCAACTATTTTCGCCGCGAGGCATCCGAGCGATGCGAAAATTCCTCAAATGCCCGCAAAATCTTCGCTCAGAGTGCGCCGACAATTTCATCAATTCAGACTTGCATTCAATTAGCGCCCAAACAATCAATTTGTCACTGCAGCGCAGTCGAGCGTCAACTCTGCGACTCAGCAATAAAAAAACGAGTTTTTTTCGCTTCAATTGCATTTCCGAAAAGAAAATTCTATAAATCAATGTCGGATTGTCGCCGCGTCGTTAGTCAGATCGAAATGTTGCTGCTGCTCGCGCTCTCCTCACTTCTTCCTCTCGCATATCTCGCTTTCAGGTGGAAGCGCCGGCGCTTTTACGCGCTGGCCAGCAAAATCCCCGGCCACGACGGTCTTCCCTTCCTCGGCGAGCTGCACAAGTTCTCGAACCTCCAGCTCAAAGACTACGCCACGAAACTCCTCAGCTACATCAACCCCGACACGAAAATCACCAAGGGATGGTTCGGGCCGCTCTTTGTCGTCGCCACCGACGACGCCGACTGCATCCACACGCTGCTTAACTCGCCGCACGCCCTCCACAAGCCCTCCTTCATCTACGACTCCTTCTTCATGGACAACGGACTGCTCGCGTGCAACGGTGACTCCTATAGTCGGCAGCGCAGGATCCTCAACCGCGCCTTCACCGCCAGCCTCGTGCACAAGTTCCTGCCGACGTTCAATGCCAAGGCGCAGCGCTGCGTCGCGAAAATGAGCGAAAAACTCGGCCGCGGCGACTTTGACGTCTTCGAGTTTGTCGGCACGTGCACGCTCGAGACTTTCTGCTGTGGGCAGCTCAACTACGACCGCGATCTCTATGCCAGCAATTTCATCAAGCTGATCGAGGAGACGCGGCCGCTCATCATGCGACGCGTCTTCTCGCCGTGGTTCAACTTCAAGCCCATTTACCGGCTCTCGTCGCTGCACCGGGCGCTCGAAAAGTACTACAAAGTTCTCATCAGCAATGTCGAGGCCATCAAGCAGAACCATCGGCTGTCGACGAACCAAACTTGCAGAGACATCGCGATAAACTTGCTGATGAACCCGCAAAACGGCTTCAGCGACGAGGAGCTGCGCGACGAGCTGATAACGTTCATTTTCGCGGGCTACGAAGCGACCGCCATCTCGCTCTCGTCCGTCCTCCTTATGCTCGCCATGCATGCCGACGTTCAGCGAAAGGTCATAGAGGAGATCGACGAGGTCGCTGGCGCCGAGGTGAATGAGGAGCTGCTGAACAGCGAGGACCTCGCGAAGCTCACTTACACCGAGATGGTCATCAAGGAGGCGCTGCGGTTGTTCGGGCCGGGCGGGATTTTGAGTCGGCAGGCGACTGGGGAGATGGAGCTGGGCGGCTACACGATTCCCGAGGGAACGGTGTTTGTATTGTCCGTGTTTGGGATGCAGAGGAGTCCGCGCTATTGGGGCGAAGATGCGCACCTGTTTCGGCCGGAGAGATTCGAACCCGGGAATATTGAGAAGATTCATCCGCACGCTTTTGCGACTTTTTCGGGCGGCAAGAGGATCTGCATCGGCAGCAAGTACGCGATGAACTTCATGAAGGTCTTCCTCATAAATTTCTTCAAAGCCTACTCGGTCGATACCCGACTCAAGTACGACGAAATAACGATCGACATGATACCGACCTTGTTCATCTCTCAGAAGTATATGATTAGCATTGCACAGAGACAA
Protein: 625 (aa)
MEAFTFNYASHRLSGHLGSKNAEGPACGAASCANCTRLPNECSTAELAAAFVKYFNYFRREASERCENSSNARKIFAQSAPTISSIQTCIQLAPKQSICHCSAVERQLCDSAIKKRVFFASIAFPKRKFYKSMSDCRRVVSQIEMLLLLALSSLLPLAYLAFRWKRRRFYALASKIPGHDGLPFLGELHKFSNLQLKDYATKLLSYINPDTKITKGWFGPLFVVATDDADCIHTLLNSPHALHKPSFIYDSFFMDNGLLACNGDSYSRQRRILNRAFTASLVHKFLPTFNAKAQRCVAKMSEKLGRGDFDVFEFVGTCTLETFCCGQLNYDRDLYASNFIKLIEETRPLIMRRVFSPWFNFKPIYRLSSLHRALEKYYKVLISNVEAIKQNHRLSTNQTCRDIAINLLMNPQNGFSDEELRDELITFIFAGYEATAISLSSVLLMLAMHADVQRKVIEEIDEVAGAEVNEELLNSEDLAKLTYTEMVIKEALRLFGPGGILSRQATGEMELGGYTIPEGTVFVLSVFGMQRSPRYWGEDAHLFRPERFEPGNIEKIHPHAFATFSGGKRICIGSKYAMNFMKVFLINFFKAYSVDTRLKYDEITIDMIPTLFISQKYMISIAQRQ
| Type | Start | End | Length |
| CDS |
3368 |
3463 |
96 |
| CDS |
3603 |
5202 |
1600 |
| CDS |
5438 |
5616 |
179 |
| intron |
3464 |
3602 |
139 |
| intron |
5203 |
5437 |
235 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001662870 |
cytochrome P450 [Aedes aegypti] gb|EAT35039.1| cytochrome P450 [Aedes aegypti] |
7e-73 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
5e-70 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.00991 |
| Pn.11892 |
| Pn.06187 |
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC003768 |
| T. castaneum |
TC015291 |
| T. castaneum |
TC015343 |
| P. vanderplanki |
Pv.10760 |
| T. castaneum |
TC011180 |
| P. vanderplanki |
Pv.10761 |
| D. plexippus |
DPOGS207389PA |
| T. castaneum |
TC008523 |
| T. castaneum |
TC015287 |
| T. castaneum |
TC015292 |
| T. castaneum |
TC015293 |
| T. castaneum |
TC015288 |
| P. vanderplanki |
Pv.01629 |
| T. castaneum |
TC015289 |
| A. aegypti |
AAEL012772 |
| T. castaneum |
TC015286 |
| A. aegypti |
AAEL012766 |
| H. melpomene |
HMEL002115-PA |
| T. castaneum |
TC015290 |
| D. plexippus |
DPOGS206995PA |