MidgeBase gene description page [Pn.11888]
Outline
| Gene ID | Pn.11888 |
| Type | Protein coding gene |
| Scaffold | PnScaf14805 |
| Start | 5727 |
| End | 8533 |
| Direction | - |
Sequence
Transcript: 405 (bp)
ATGTATATCCATGTATCGTACGCATATGTGTCTGGAAGAGCAAAGTATAGGAAACAAGAGAAGCAGCTGCAGAAGGCCTTAGCTCCTTCAGTGATACCCTCATGTAATGGTATGATGCGAAACATTCAGGGCTATAGCGTATCTCGATCTTATCAACCATATCCGCATCCGAATTCGATCAATCGCTATCCTCAAGATCTCTTTCAAATGGGAGCGTCATCGTATCCAGGTATGACGCAGCCATTTTCAATGTCACATAGTTCAAACATGGGTTCCGTCGGCGTTCGTCAAGACTCAATGAGTATGTCTGCAGAGGATGAATGGTACAATAAAAGTCTCTCAGCTTTAAGAATGAATAGCTCGCATCATCCAAATTTATCAGCGCCAATGCTGCAGTATCAAACA
Protein: 135 (aa)
MYIHVSYAYVSGRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRSYQPYPHPNSINRYPQDLFQMGASSYPGMTQPFSMSHSSNMGSVGVRQDSMSMSAEDEWYNKSLSALRMNSSHHPNLSAPMLQYQT
| Type | Start | End | Length |
| CDS |
5730 |
5833 |
104 |
| CDS |
6201 |
6306 |
106 |
| CDS |
6413 |
6572 |
160 |
| CDS |
6660 |
6665 |
6 |
| CDS |
8505 |
8533 |
29 |
| intron |
5834 |
6200 |
367 |
| intron |
6307 |
6412 |
106 |
| intron |
6573 |
6659 |
87 |
| intron |
6666 |
8504 |
1839 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001963612 |
GF20486 [Drosophila ananassae] gb|EDV44688.1| GF20486 [Drosophila ananassae] |
2e-63 |
| Pfam |
PF12570.3 |
Protein of unknown function (DUF3750) |
0.088 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL002797-PA |
| B. mori |
BGIBMGA008456-TA |
| C. quinquefasciatus |
CPIJ009974 |
| S. invicta |
SI2.2.0_14030 |
| P. humanus |
PHUM230750-PA |
| A. aegypti |
AAEL001148 |
| D. plexippus |
DPOGS211337PA |
| N. vitripennis |
NV30544-PA |
| D. melanogaster |
FBgn0052532 |
| A. mellifera |
GB11083-PA |
| S. invicta |
SI2.2.0_05758 |
| T. castaneum |
TC007335 |
| P. vanderplanki |
Pv.12890 |
| A. gambiae |
AGAP002487 |