MidgeBase gene description page [Pn.11837]
Outline
| Gene ID | Pn.11837 |
| Type | Protein coding gene |
| Scaffold | PnScaf14674 |
| Start | 32287 |
| End | 39189 |
| Direction | + |
Sequence
Transcript: 3030 (bp)
ATGACGATGCGCGAGCAAGAAGTCGGTGTGTTCGATTTCGTCCTTCTGGATGAAATCACACTGGAAAAATTCATGCAGAATCTACAAAAAAGATATCAGGCGGGAAAAATCTACACCTATATTGGCGAGGTCGCGATTTCAGTGAATCCATATCGCACGATGAATATTTATGGCAACGACTATATCAACAAGTACAAGAACCGAGAGCTTTTCGAGAATCCGCCGCATATTTACGCGATCGCCGATGCAGCGTACCGAGACCTAAGGCAGCAGAACAAAGACACATGCATAGTCATATCAGGCGAATCGGGAAGCGGAAAGACGGAGGCCTCGAAGATTATCATGAAATACATTGCTGCCGTGACGAATGCTCACTCGCAGCATGAAATCGATAGAGTGAAAAATGTTCTCATCCAGTCGAACACAATACTCGAGACATTCGGAAATGCGAAAACCAACCGCAACGACAACTCCTCGCGATTCGGCAAGTACATGGACATCGAGTTCGATTTCAAGCACGACCCGGTCGGTGGCATAATTACGAACTTCTTGCTCGAGAAGTCGCGCATTGTGCAGCAGCAAGAGGGCGAGCGGAATTTTCATTGCTTTTATCAGCTCCTTCGAGGCTCCTCTGATGCCGAGCTCAAGCAGTTTGCGCTGAGTCGTGACCCGGCGCACTACCACTATACAAACCAGGGCTCCACTGAGACACTCTCCGAGCGCAATGACTTCAAGACCACGCAGCAAGCTTTCAAAGCGTTTGGCTTCTCGGGTGATGAGATCAACACTATTTGGCGAACAGTTGCCGCGATTTTGCAGCTCGGAAATATCGAATTTGCGTTGCAGGACGATGAAATCGTGATTAAAAACAGAAAACAGTTGAAAACGGTAGCCACCTTGCTGGCCGTAACCGAGGCGGAGGCATCGACAGCTCTGACTCAGCGAGTAATTGCCGCGCATGGTGACATCATGAAGAAACAACACGACAAGACACAGGCCGAGTTTGGGCGAGATGCGTTTGCAAAAGCCATCTACGATCGTCTGTTCAAATGGATTGTTGAACGCATAAACAAGGCCATTGAGGTTCCCAACAAAAAGCTCGCGAAGCGCTTCAACCGCGTTATCGGCGTCGTGGACATTTATGGCTTCGAGATTTTCGAGCGAAACAACTTTGAGCAATTCTGCATCAACTACTGCAACGAGAAATTACAGCAGCTTTTCATCGAGCTCGTGTTGAAGCAGGAGCAGGAGGAATACCAGCGTGAGGGAATCGCGTGGACGAACGTCGAGTACTTCAACAACCAAATAATTTGCGACCTCGTCGAGGCGCCGCACAAAGGAATCATTTCCATAATGGATGAGGCTTGCATGACAGTCGGCAAGATAAATGACGAGATGCTCCTTGAGGCCATGGACAAAAAGCTCGCCCACCACAAGCACTACTCGAGTCGCCAGCTCAAACCAATGGACAAGGAGCTCAAGCACAAGCAGGACTTCCGCATCACTCACTACGCAGGCGATGTCGTGTATAACGTGATCGGCTTCATCGAGAAAAACAAGGACACTCTGTATCAGGACTTTAAGCGCCTGCTCTACCATTCGAGCGACAAGATCATGTCGTCGATGTGGCCGGAGGGTGCACAGGACATCACGAAAATCACAAAGAGGCCGCTTACGGCCGGCACCATTTTCATGAAATCGATGAGCGACCTCGTGCAGACGCTGCTTTCGAAGGAGCCGTTCTACGTGCGATGCATTAAGCCTAACGACACGAAGTCGTCGGTTTTGTTCGACGATGTGCGCGTCGAGCACCAGGTGCGCTACCTTGGACTGCTCGAGAACGTTCGCGTTCGACGTGCCGGTTTTGTTCACCGACAACGCTACGACAAATTTCTGCTGCGCTACAAGATGCTTTCGCAGTACACATGGCCAAACTTCAAGGGACCGTCAGACCGCGACGGCGTCCGAGTACTGCTCGAGGAAAAGCGGCTGCTGAGCGACTGTAAGTTTGGACACACGAAGGTCTTCATCCGGAGCCCGCGCACCCTCTTCCAGCTGGAACGTGAGCGCAACGAGATGATTCCTAACATCATCATCTTCCTGCAGAAGCAAGTGCGTGGTTGGATCGCGCGCCAAAACTACAAGAAAATGAAGGCCGCTGCGACGATTATGCGCGTCTACAGACACCTCAAATTGCGCAGCTACGTCGCGACACTTGCACTGCGCTTCCAGCATGCGAAAAAGATGCGCGACTACGGAAAGTCGATCCAGTGGCCAGTGCCGCCGGCAGTTGGTCGAGAGGCGGAGTTTCACCTTAAGCAGATGTACGGAAATTGGCGAGCGGCGATGATTTTGAAACGATATCCGCGCAACGAATGGCCGCAGTTGCGGCTGCAAATAATCACGGCAACCGCGCTGAAGAGACGTAGAAAGTACTGGGGTCAGGAGCGCAAGTGGATGGGCAATTATCTAGCGATGTCGACAGAAAACTCCAACTACTCGTCCTTTAATTCGAGCGTCAACAACATCAAGAACACCGAGCAGTATCACCACGTTCTCTTCTCGTCTTTCGTGAAGAAGTTCAACAAGTGCAACAAGTCCGCCGATCGCTCGATCATCGTCACCGACACGGGCATCTATAAGCTCGACGGCGCCAAGAACAAATTTAAGAACATGAAGCGCTCGATCGCCATCAAGGAGATCTCGAGCATTTCAATTTCGCCGGGCCGCGATCAATTGATTGTTTTCCATTCGCACCACAACAACGACCTGATCGTGAACTTACAGAGCGAATACACGCAGCTAAAGGAGGATCGAATTGGCGAGGTGATCGGCCATGTGTGCAAGAAGTACTTTGACATGACGAGTCGAGAACTGCCCGTCAACGTTGCCAGCACGTTCTCGGTGAATTTGGGCGGGAAGCCGAGAAAAGTGTCGATCGAGGCGGTCGCTGGCGTCGAAAATGTCGGCTTCAAGCACGCTGGTCAAATCATCGTGTTCGAGGTGCCAAGCTCGTACGCATCGTCAATA
Protein: 1010 (aa)
MTMREQEVGVFDFVLLDEITLEKFMQNLQKRYQAGKIYTYIGEVAISVNPYRTMNIYGNDYINKYKNRELFENPPHIYAIADAAYRDLRQQNKDTCIVISGESGSGKTEASKIIMKYIAAVTNAHSQHEIDRVKNVLIQSNTILETFGNAKTNRNDNSSRFGKYMDIEFDFKHDPVGGIITNFLLEKSRIVQQQEGERNFHCFYQLLRGSSDAELKQFALSRDPAHYHYTNQGSTETLSERNDFKTTQQAFKAFGFSGDEINTIWRTVAAILQLGNIEFALQDDEIVIKNRKQLKTVATLLAVTEAEASTALTQRVIAAHGDIMKKQHDKTQAEFGRDAFAKAIYDRLFKWIVERINKAIEVPNKKLAKRFNRVIGVVDIYGFEIFERNNFEQFCINYCNEKLQQLFIELVLKQEQEEYQREGIAWTNVEYFNNQIICDLVEAPHKGIISIMDEACMTVGKINDEMLLEAMDKKLAHHKHYSSRQLKPMDKELKHKQDFRITHYAGDVVYNVIGFIEKNKDTLYQDFKRLLYHSSDKIMSSMWPEGAQDITKITKRPLTAGTIFMKSMSDLVQTLLSKEPFYVRCIKPNDTKSSVLFDDVRVEHQVRYLGLLENVRVRRAGFVHRQRYDKFLLRYKMLSQYTWPNFKGPSDRDGVRVLLEEKRLLSDCKFGHTKVFIRSPRTLFQLERERNEMIPNIIIFLQKQVRGWIARQNYKKMKAAATIMRVYRHLKLRSYVATLALRFQHAKKMRDYGKSIQWPVPPAVGREAEFHLKQMYGNWRAAMILKRYPRNEWPQLRLQIITATALKRRRKYWGQERKWMGNYLAMSTENSNYSSFNSSVNNIKNTEQYHHVLFSSFVKKFNKCNKSADRSIIVTDTGIYKLDGAKNKFKNMKRSIAIKEISSISISPGRDQLIVFHSHHNNDLIVNLQSEYTQLKEDRIGEVIGHVCKKYFDMTSRELPVNVASTFSVNLGGKPRKVSIEAVAGVENVGFKHAGQIIVFEVPSSYASSI
| Type | Start | End | Length |
| CDS |
32287 |
32378 |
92 |
| CDS |
35602 |
35904 |
303 |
| CDS |
36003 |
36222 |
220 |
| CDS |
36333 |
37222 |
890 |
| CDS |
37584 |
38936 |
1353 |
| CDS |
39015 |
39186 |
172 |
| intron |
32379 |
35601 |
3223 |
| intron |
35905 |
36002 |
98 |
| intron |
36223 |
36332 |
110 |
| intron |
37223 |
37583 |
361 |
| intron |
38937 |
39014 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001847067 |
myosin i [Culex quinquefasciatus] gb|EDS45493.1| myosin i [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR010926 |
Myosin tail 2 |
|
| InterPro |
IPR001609 |
Myosin head, motor domain |
|
| InterPro |
IPR000048 |
IQ motif, EF-hand binding site |
|
| Gene Ontology(CC) |
GO:0016459 |
myosin complex |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0003774 |
motor activity |
|
| Pfam |
PF00612.22 |
IQ calmodulin-binding motif |
0.00055 |
| Pfam |
PF13207.1 |
AAA domain |
0.0054 |
| Pfam |
PF00063.16 |
Myosin head (motor domain) |
1.9e-220 |
| Pfam |
PF13238.1 |
AAA domain |
0.0017 |
| Pfam |
PF00437.15 |
Type II/IV secretion system protein |
0.029 |
| Pfam |
PF06017.8 |
Myosin tail |
9.5e-40 |
| Pfam |
PF13401.1 |
AAA domain |
0.012 |
| Pfam |
PF13191.1 |
AAA ATPase domain |
0.13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04592 |
| Pn.06824 |
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000439182 |
| D. melanogaster |
FBgn0086347 |
| H. sapiens |
ENSP00000393392 |
| M. musculus |
ENSMUSG00000018417 |
| A. aegypti |
AAEL011905 |
| M. musculus |
ENSMUSG00000017774 |
| H. sapiens |
ENSP00000352834 |
| S. invicta |
SI2.2.0_02170 |
| H. sapiens |
ENSP00000354283 |
| D. melanogaster |
FBgn0010246 |
| N. vitripennis |
NV11216-PA |
| H. sapiens |
ENSP00000341903 |
| H. sapiens |
ENSP00000444076 |
| P. humanus |
PHUM225150-PA |
| H. sapiens |
ENSP00000460038 |
| H. sapiens |
ENSP00000459271 |
| D. plexippus |
DPOGS200868PA |
| C. quinquefasciatus |
CPIJ015035 |
| H. sapiens |
ENSP00000459174 |
| H. melpomene |
HMEL009552-PA |
| H. sapiens |
ENSP00000462055 |
| H. sapiens |
ENSP00000391442 |
| M. musculus |
ENSMUSG00000025401 |
| D. plexippus |
DPOGS210538PA |
| H. sapiens |
ENSP00000440514 |
| C. quinquefasciatus |
CPIJ005350 |
| A. mellifera |
GB18825-PA |
| H. sapiens |
ENSP00000344871 |
| A. mellifera |
GB15928-PA |
| H. sapiens |
ENSP00000388140 |
| A. aegypti |
AAEL012922 |
| B. mori |
BGIBMGA009857-TA |
| M. musculus |
ENSMUSG00000066952 |
| S. invicta |
SI2.2.0_13577 |
| H. melpomene |
HMEL018017-PA |
| D. melanogaster |
FBgn0039157 |
| H. sapiens |
ENSP00000464741 |
| P. vanderplanki |
Pv.00592 |
| T. castaneum |
TC001321 |
| S. invicta |
SI2.2.0_09776 |
| P. humanus |
PHUM104070-PA |
| A. mellifera |
GB12318-PA |
| H. sapiens |
ENSP00000258787 |
| M. musculus |
ENSMUSG00000032220 |
| D. plexippus |
DPOGS201190PA |
| H. sapiens |
ENSP00000288235 |
| C. quinquefasciatus |
CPIJ005615 |
| P. humanus |
PHUM170180-PA |
| H. sapiens |
ENSP00000376132 |
| H. sapiens |
ENSP00000412197 |
| H. sapiens |
ENSP00000376130 |
| H. sapiens |
ENSP00000306382 |
| H. sapiens |
ENSP00000324527 |
| H. sapiens |
ENSP00000300119 |
| T. castaneum |
TC011553 |
| P. vanderplanki |
Pv.09304 |
| H. sapiens |
ENSP00000464305 |
| H. melpomene |
HMEL012626-PA |
| M. musculus |
ENSMUSG00000024300 |
| H. sapiens |
ENSP00000454113 |
| M. musculus |
ENSMUSG00000035441 |
| A. mellifera |
GB16816-PA |
| H. sapiens |
ENSP00000451033 |
| T. castaneum |
TC005895 |
| P. vanderplanki |
Pv.02493 |
| A. gambiae |
AGAP010160 |
| H. sapiens |
ENSP00000437685 |
| N. vitripennis |
NV14451-PA |
| A. aegypti |
AAEL012631 |
| A. gambiae |
AGAP004403 |