MidgeBase gene description page [Pn.11828]
Outline
| Gene ID | Pn.11828 |
| Type | Protein coding gene |
| Scaffold | PnScaf14649 |
| Start | 9599 |
| End | 30610 |
| Direction | - |
Sequence
Transcript: 2052 (bp)
ATGGCTACGACCAGTACACGATTTACAGATAATTATGAGATTAAAGAGGAATTAGGAAAAGGTGCATTTTCAATAGTGAAACGATGTGTTCAAAAATCAACAGGACTCGAATTTGCAGCAAAAATTATTAACACAAAAAAACTAACTTCTAGAGACTTCCAAAAGCTCGAACGTGAGGCAAGAATTTGTCGGAAATTGCAGCATCCAAATATAGTGAGACTCCATGATTCAATCTCAGAGGAGAATTACCACTATCTAATATTCGATCTTGTTACGGGAGGCGAATTGTTTGAAGATATCGTTGCACGTGAATTCTATTCAGAAGCCGACGCTTCGCATTGCATCCAACAAATTCTCGAGTCTGTTAATCACTGCCACCAAAATGGCGTCGTTCATCGTGATTTGAAGCCTGAAAATCTCTTATTAGCTAGTAAAGCAAAAGGTGCTGCTGTGAAGTTGGCCGACTTTGGCCTTGCCATCGAGGTGCAGGGTGACCAACAAGCATGGTTCGGCTTTGCTGGCACTCCAGGGTATCTCTCGCCAGAAGTATTAAAGAAGGAACCATATGGCAAAGCCGTCGACATTTGGGCGTGCGGCGTAATTCTCTACATTCTTCTCGTCGGTTATCCGCCATTTTGGGACGAAGATCAGCACCGTTTATATGCACAAATTAAGGCTGGTACATATGATTATCCGAGTCCAGAATGGGACACCGTCACAACAGAAGCTAAGAATTTGATCAATCAAATGTTAACTGTAAATCCTTACAAGAGAATTACAGCGGCCGAGGCTTTGAAGCATCCATGGATTTGCCAACGTGAACGTGTTGCATCTGTTGTACATAGACAAGAGACTGTCGATTGCTTGAAGAAATTCAACGCGCGGCGCAAACTTAAGGGTGCCATTTTAACTACAATGCTGGCAACTAGAAATTTTTCAAGTAAAAGCATAATAACGAAAAAGAGTGATGGCTCTGGAGCAAAGGAGAAGGAGTCGACAGATTCGAGTACGACTCTCGAGGATGAAGACGTCAAGGATGATAAGAAAGGAGGCGTGGATCGCAGCTCAACAGTCATAGCTAAAGATCCAGAAGACAGACCGACAACATCGGCGACAGCTGGCTTCATCGGAAGTTCATTGCAAGCCATTGCAGCAACGGGATTGGGACCGGCAGTGGAGAATATCATAAGTGGTAACAACATCAATCAAAATCAAGATCATGCGAGAAGAGCTTCAACGCCTGGCGTGTCGTCATCATCAAACTCAGGTGGTGGCGGAGGCGGCGGAGGATTTAGTAGCATTTTCAATTTAAAGTCTGTAATAAATGCCGCTACAAAGACGGGACATCAGCAACCTCAGCAGCAACAGCAACAAACTCCTCCTCCTATTCCAGTGTCGAATTCAAATTTTTATGTGCCGCAACCACCTGTTGCAGCGCCAGATCAGACGTTAGTAGATACACACACAGCAATGTCACAAAAGACCGTCCAAGAGGATTCAGATGTTGCGTATCGTCCATTGGGCATGCATAAGCGCAACGACAGTTGGTCACACGAGGACATCAGGATTGTGTGTCCTGCAAAAACTTACTCTCAACTTTCCACCAACTCACAAAGTTCAGCTCGTCGTCAGGAAATCATTAAAATGACTGAACAATTGATTGAGGCCATCAACAATGGTGATTTCGATGCATATACCAAAATATGTGATCCTCACGTAACTGCATTTGAGCCGGAATCTCTTGGCAACTTAGTAGAAGGGATGGACTTTCACAAATTCTATTTTGAGAACGTGCTGGGCAAAAATTGTAAGGCTATTAATACAACCATTCTGAATCCTCACGTTCACTTGCTGGGCGATGAAACTGCATGCATTGCATATGTGAGACTCACACAGTACATTGATAAACAAGGCCACGCTCACACTCATCAATCCGAGGAGACGCGTGTTTGGCACAAGCGTGATGGTAAATGGCAGAATGTTCACATTCATCGCAGCTACACCGGCAATTTGAGTGGAGCAACGCCATTCGATTTTGGTCACGGCAGCAAA
Protein: 684 (aa)
MATTSTRFTDNYEIKEELGKGAFSIVKRCVQKSTGLEFAAKIINTKKLTSRDFQKLEREARICRKLQHPNIVRLHDSISEENYHYLIFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLKKEPYGKAVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGTYDYPSPEWDTVTTEAKNLINQMLTVNPYKRITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSKSIITKKSDGSGAKEKESTDSSTTLEDEDVKDDKKGGVDRSSTVIAKDPEDRPTTSATAGFIGSSLQAIAATGLGPAVENIISGNNINQNQDHARRASTPGVSSSSNSGGGGGGGGFSSIFNLKSVINAATKTGHQQPQQQQQQTPPPIPVSNSNFYVPQPPVAAPDQTLVDTHTAMSQKTVQEDSDVAYRPLGMHKRNDSWSHEDIRIVCPAKTYSQLSTNSQSSARRQEIIKMTEQLIEAINNGDFDAYTKICDPHVTAFEPESLGNLVEGMDFHKFYFENVLGKNCKAINTTILNPHVHLLGDETACIAYVRLTQYIDKQGHAHTHQSEETRVWHKRDGKWQNVHIHRSYTGNLSGATPFDFGHGSK
| Type | Start | End | Length |
| CDS |
9602 |
9633 |
32 |
| CDS |
9749 |
9861 |
113 |
| CDS |
9976 |
10090 |
115 |
| CDS |
10159 |
10253 |
95 |
| CDS |
10332 |
10407 |
76 |
| CDS |
12638 |
12700 |
63 |
| CDS |
15411 |
15476 |
66 |
| CDS |
16885 |
17283 |
399 |
| CDS |
18427 |
18483 |
57 |
| CDS |
20885 |
20980 |
96 |
| CDS |
21282 |
21324 |
43 |
| CDS |
21417 |
21500 |
84 |
| CDS |
23226 |
23348 |
123 |
| CDS |
23489 |
23722 |
234 |
| CDS |
23798 |
23984 |
187 |
| CDS |
26502 |
26556 |
55 |
| CDS |
29270 |
29329 |
60 |
| CDS |
29403 |
29497 |
95 |
| CDS |
30552 |
30610 |
59 |
| intron |
9634 |
9748 |
115 |
| intron |
9862 |
9975 |
114 |
| intron |
10091 |
10158 |
68 |
| intron |
10254 |
10331 |
78 |
| intron |
10408 |
12637 |
2230 |
| intron |
12701 |
15410 |
2710 |
| intron |
15477 |
16884 |
1408 |
| intron |
17284 |
18426 |
1143 |
| intron |
18484 |
20884 |
2401 |
| intron |
20981 |
21281 |
301 |
| intron |
21325 |
21416 |
92 |
| intron |
21501 |
23225 |
1725 |
| intron |
23349 |
23488 |
140 |
| intron |
23723 |
23797 |
75 |
| intron |
23985 |
26501 |
2517 |
| intron |
26557 |
29269 |
2713 |
| intron |
29330 |
29402 |
73 |
| intron |
29498 |
30551 |
1054 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003224264 |
PREDICTED: calcium/calmodulin-dependent protein kinase type II subunit beta-like [Anolis carolinensis] |
0.0 |
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR013543 |
Calcium/calmodulin-dependent protein kinase II, association-domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004683 |
calmodulin-dependent protein kinase activity |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0005516 |
calmodulin binding |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF08332.5 |
Calcium/calmodulin dependent protein kinase II Association |
6.3e-63 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
4e-35 |
| Pfam |
PF00069.20 |
Protein kinase domain |
2.1e-75 |
| Pfam |
PF06293.9 |
Lipopolysaccharide kinase (Kdo/WaaP) family |
0.0029 |
| Pfam |
PF12680.2 |
SnoaL-like domain |
0.066 |
| Pfam |
PF13474.1 |
SnoaL-like domain |
1.1e-10 |
| Pfam |
PF07146.6 |
Protein of unknown function (DUF1389) |
0.14 |
| Pfam |
PF13577.1 |
SnoaL-like domain |
0.031 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000415248 |
| H. sapiens |
ENSP00000378030 |
| C. quinquefasciatus |
CPIJ017648 |
| H. sapiens |
ENSP00000423677 |
| P. humanus |
PHUM536570-PA |
| H. sapiens |
ENSP00000390292 |
| A. aegypti |
AAEL013824 |
| H. melpomene |
HMEL010105-PA |
| H. sapiens |
ENSP00000361851 |
| H. sapiens |
ENSP00000277853 |
| H. sapiens |
ENSP00000296402 |
| M. musculus |
ENSMUSG00000024617 |
| H. sapiens |
ENSP00000379096 |
| M. musculus |
ENSMUSG00000053819 |
| H. sapiens |
ENSP00000261793 |
| H. sapiens |
ENSP00000326427 |
| H. sapiens |
ENSP00000422566 |
| H. sapiens |
ENSP00000339740 |
| H. sapiens |
ENSP00000410298 |
| H. sapiens |
ENSP00000378243 |
| H. sapiens |
ENSP00000369098 |
| H. sapiens |
ENSP00000423482 |
| H. sapiens |
ENSP00000326600 |
| H. sapiens |
ENSP00000378032 |
| H. sapiens |
ENSP00000406131 |
| P. vanderplanki |
Pv.02835 |
| A. aegypti |
AAEL013823 |
| H. sapiens |
ENSP00000351542 |
| H. sapiens |
ENSP00000381412 |
| M. musculus |
ENSMUSG00000021820 |
| H. sapiens |
ENSP00000307082 |
| D. plexippus |
DPOGS215862PA |
| H. sapiens |
ENSP00000379098 |
| H. sapiens |
ENSP00000405561 |
| H. sapiens |
ENSP00000326544 |
| H. sapiens |
ENSP00000258682 |
| H. sapiens |
ENSP00000378034 |
| D. melanogaster |
FBgn0264607 |
| H. sapiens |
ENSP00000415707 |
| A. mellifera |
GB17817-PA |
| T. castaneum |
TC002587 |
| H. sapiens |
ENSP00000326375 |
| N. vitripennis |
NV14677-PA |
| A. gambiae |
AGAP000028 |
| H. sapiens |
ENSP00000422416 |
| S. invicta |
SI2.2.0_10148 |
| H. sapiens |
ENSP00000315599 |
| H. sapiens |
ENSP00000424245 |
| H. sapiens |
ENSP00000425824 |
| M. musculus |
ENSMUSG00000057897 |
| H. sapiens |
ENSP00000326518 |
| H. sapiens |
ENSP00000393784 |
| H. sapiens |
ENSP00000319060 |
| H. sapiens |
ENSP00000397937 |
| B. mori |
BGIBMGA000408-TA |