MidgeBase gene description page [Pn.11710]
Outline
| Gene ID | Pn.11710 |
| Type | Protein coding gene |
| Scaffold | PnScaf14314 |
| Start | 30581 |
| End | 32441 |
| Direction | - |
Sequence
Transcript: 1530 (bp)
ATGCCTAATTTAGTTGAGTTGAACAGTCCGACCGAGACAGTCATGGAACTCGTTCAGTCGCCAACAGACTCGATTAGAGAGGCGCCTGCACTTCCCAGCGACAGCAATGACGGTTCAGAGCCAAAGGAGCGCGTCAAGATGAAGAAGGAGCTCGGCTTGCTCGAAGGATGTGCAATCATTCTCGGCATTATTTTCGGATCGGGAATCTTCATCTCGCCAAAGGGAGTGATACAAGAGGTCAACGCCCCGGGAACATCGCTGGTGATATGGACGCTGTGCGGGTTGCTCTCGATGATTGGCGCTCTGTGCTACGCTGAACTTGGCTGCTGCATTCCGAAGTCAGGTGGCGACTACACATACATCGGCGAGGCGTTTGGCGATCTACCAAGTTTTCTCTACATCTGGGATGCGACGGTGATTTTCGTTCCCGCAACAAATGCAATCATGTCGCTCACGTTCGCCAACTACGTTCTGCAGCCCTTTTACGCGCCCGAGTGCAAAGTGCCCGAGCTGGCGTCGCAGCTGCTTGCGGCAGCCACGATATGCGGTCTGACTTACTTGAACTCGTTCAACGTTCGAGCAACAACCAAAATGCAGAATGTCATCATGTTCACAAAGATTGCTGCTCTTGTGATAATCATTCTCGTCGGCATCGTCTACATGTCGCTGGGAAATACTCAAAATTTCGATAATGCCTTTGAGAATTCGGAGACGGATCCTGGCAAGCTGGCAGTTGCCTTTTACAGCGGCATCTTCTCCTACGCAGGCTGGAACTATCTGAACTTCATGACTGAGGAGTTGAGAGATCCCTACAAGAATCTGCCTCGCGCCATCTACATCAGTCTGCCGCTCGTGACAATCATCTATGTGCTGGCAAACGTTGCATATCTGGCTGTGCTGACGCCTCAGGAAATGATTGCGAGCAACGCAATCGCAGTGACCTTCGGCGACAAGGTGCTCACCTACGGCTCGTGGATTATTCCGATAATGGTGGCGATTTCGGCGTTCGGCGGACTGTCGGTGCACATCATGACCAGCTCGCGAATGTGCTTTGTGTCGGCGCGAAACGGCCACATGCCCGAGCTGCTGAGCTTCATCAACGTGAAGAGATTCACGCCGACGCCGTCGCTCGTGTTCCTCTGCTTGCTGAGTCTCCTCTACCTGTTCATCAGCGACGTGTACGTGCTGATAACCTACTCGAGCGTGGTCGAGACGTTTTTCATCATGCTGTCGGTGACGGGCGTTCTCTACTTCCGGTGGAAGCGACCCGACATGCCGCGACCCATAAAGGTGAACATCGCAATTCCGATAATTTTCGTCGGCATCTGCATCTTCCTCATCATCGTGCCGGTGTATCAGGTTCCGATGGAAGTCTTCATGGGCGCTCTCATCACCGTGTCGGGAATTCCGTTTTATCTGCTTTGCGTGGCGTGGAAGCGCAAGCCGAAGGGCTTCCAGAACGTGATAGACGTCATAACAATCTGCATGCAGAAGCTGTTCATGAGTGCCAAAGAGGAGCAAGACATCGAA
Protein: 510 (aa)
MPNLVELNSPTETVMELVQSPTDSIREAPALPSDSNDGSEPKERVKMKKELGLLEGCAIILGIIFGSGIFISPKGVIQEVNAPGTSLVIWTLCGLLSMIGALCYAELGCCIPKSGGDYTYIGEAFGDLPSFLYIWDATVIFVPATNAIMSLTFANYVLQPFYAPECKVPELASQLLAAATICGLTYLNSFNVRATTKMQNVIMFTKIAALVIIILVGIVYMSLGNTQNFDNAFENSETDPGKLAVAFYSGIFSYAGWNYLNFMTEELRDPYKNLPRAIYISLPLVTIIYVLANVAYLAVLTPQEMIASNAIAVTFGDKVLTYGSWIIPIMVAISAFGGLSVHIMTSSRMCFVSARNGHMPELLSFINVKRFTPTPSLVFLCLLSLLYLFISDVYVLITYSSVVETFFIMLSVTGVLYFRWKRPDMPRPIKVNIAIPIIFVGICIFLIIVPVYQVPMEVFMGALITVSGIPFYLLCVAWKRKPKGFQNVIDVITICMQKLFMSAKEEQDIE
| Type | Start | End | Length |
| CDS |
30584 |
31310 |
727 |
| CDS |
31419 |
31899 |
481 |
| CDS |
32052 |
32151 |
100 |
| CDS |
32220 |
32441 |
222 |
| intron |
31311 |
31418 |
108 |
| intron |
31900 |
32051 |
152 |
| intron |
32152 |
32219 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002098833 |
GE10586 [Drosophila yakuba] gb|EDW98545.1| GE10586 [Drosophila yakuba] |
0.0 |
| InterPro |
IPR002293 |
Amino acid/polyamine transporter I |
|
| Gene Ontology(BP) |
GO:0003333 |
amino acid transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0015171 |
amino acid transmembrane transporter activity |
|
| Pfam |
PF13520.1 |
Amino acid permease |
2.1e-64 |
| Pfam |
PF00324.16 |
Amino acid permease |
5.1e-27 |
| Pfam |
PF08294.6 |
TIM21 |
5 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL012437-PA |
| D. plexippus |
DPOGS203336PA |
| N. vitripennis |
NV14792-PA |
| S. invicta |
SI2.2.0_09992 |
| H. sapiens |
ENSP00000416398 |
| H. sapiens |
ENSP00000434345 |
| A. mellifera |
GB19129-PA |
| D. plexippus |
DPOGS211190PA |
| S. invicta |
SI2.2.0_02824 |
| M. musculus |
ENSMUSG00000022180 |
| H. sapiens |
ENSP00000465421 |
| P. humanus |
PHUM050830-PA |
| A. gambiae |
AGAP011386 |
| H. sapiens |
ENSP00000391577 |
| B. mori |
BGIBMGA003856-TA |
| N. vitripennis |
NV13760-PA |
| M. musculus |
ENSMUSG00000040010 |
| P. vanderplanki |
Pv.14584 |
| T. castaneum |
TC013186 |
| P. humanus |
PHUM136660-PA |
| D. melanogaster |
FBgn0002778 |
| A. aegypti |
AAEL014161 |
| D. melanogaster |
FBgn0039487 |
| H. melpomene |
HMEL017938-PA |
| H. sapiens |
ENSP00000253188 |
| B. mori |
BGIBMGA003178-TA |
| A. gambiae |
AGAP003425 |
| H. sapiens |
ENSP00000320378 |
| H. sapiens |
ENSP00000261622 |
| H. sapiens |
ENSP00000435114 |
| A. aegypti |
AAEL002525 |
| P. vanderplanki |
Pv.13909 |
| T. castaneum |
TC000687 |
| C. quinquefasciatus |
CPIJ015772 |