MidgeBase gene description page [Pn.11695]
Outline
| Gene ID | Pn.11695 |
| Type | Protein coding gene |
| Scaffold | PnScaf14253 |
| Start | 2065 |
| End | 3320 |
| Direction | + |
Sequence
Transcript: 765 (bp)
ATGTTCAAGTTTGTCGTTCTCCTCGGTCTTGTCGCTTCGGCACTCGGAGCCAGCCTCACCTCGCCCGTCATCGATCCCGAGTGGGAGGGCTTCATTGTCGGCGGCTCGACCGCATCGCTCGGCCAGTTCCCGCACCAAGTTTCGCTTCGAAGCGGTGCCAACGCTCACTTCTGCGGTGGTTTCATCATCAACAACCGCTGGGTCGGATCAGCCGCTCATTGCACGGTGGGACGCACTGCTGCCAACACGATCAGCGTTGTGGGCACAGTCAGCCGCACGGCTGGCGGTGTCTCGCATGGAACAGCGCGCATCGTGAACCACCCGAGCTATAACGCCAACACCCTTGCTAACGACATCTCGATGGTGCAGACGACGACCACGATCGGCTTCACTGGCAACATCCAGCCCATCACGCTAGGCTCGGCCTTTGTGGGCGGCGGCGTTCAGTCGACTGTTTCTGGCTGGGGTCAGACTAGCCATCCGGGCTCAGCTGCGGCCACGCTACAGTTTCTAAATGTGCCCACGCTCACAAACGCTGACTGTCGCTCGCGCCACTCCACCGCCAACGCCGCGCGCGTCTTCGACAACACCATCTGCACCTTCCTCCGCTCTGGCACCGGCACATGCATGGGCGACAGTGGCGGCCCCTTGATTAGCGGTGGAACCGTCATCGGCGCCGTCTCGTGGGGCATCGCCTGCGCCCAAGGCTTCCCCGACGTCTACGCTCGTATTTCCTCGCACCGCTCGTGGATGATCAGCCAGATG
Protein: 255 (aa)
MFKFVVLLGLVASALGASLTSPVIDPEWEGFIVGGSTASLGQFPHQVSLRSGANAHFCGGFIINNRWVGSAAHCTVGRTAANTISVVGTVSRTAGGVSHGTARIVNHPSYNANTLANDISMVQTTTTIGFTGNIQPITLGSAFVGGGVQSTVSGWGQTSHPGSAAATLQFLNVPTLTNADCRSRHSTANAARVFDNTICTFLRSGTGTCMGDSGGPLISGGTVIGAVSWGIACAQGFPDVYARISSHRSWMISQM
| Type | Start | End | Length |
| CDS |
2065 |
2278 |
214 |
| CDS |
2767 |
3317 |
551 |
| intron |
2279 |
2766 |
488 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ACF19792 |
serine-type enodpeptidase SP [Chironomus riparius] |
1e-120 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
2.2e-49 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL007938 |
| A. aegypti |
AAEL011916 |
| A. aegypti |
AAEL011919 |
| A. aegypti |
AAEL011913 |
| C. quinquefasciatus |
CPIJ011380 |
| P. vanderplanki |
Pv.04980 |
| A. gambiae |
AGAP011920 |
| A. mellifera |
GB19846-PA |
| A. aegypti |
AAEL006627 |
| A. aegypti |
AAEL011929 |