MidgeBase gene description page [Pn.11623]
Outline
| Gene ID | Pn.11623 |
| Type | Protein coding gene |
| Scaffold | PnScaf13955 |
| Start | 33712 |
| End | 34438 |
| Direction | - |
Sequence
Transcript: 669 (bp)
ATGAAGTACAAGGTTGGCAATCCTGAAGAGCAAGGAAATTATTTTGAAGGAGACATAATTTTAAATTTGGACCAGAGAAACGGCGTCAGGTTGCCCACACAGCGATGGGAAAATGGAATTATTCCGTACAAAATCAGTAAAAGTTTCACAATCAAGCAGAAAAACGTAATTAGCGACGCAATTGATGAAATTCAGAGCAAAACTTGCATAAAACTGAGACCACGCGCAGGAGAGAAGGATTACGTTTCTTTTGAAAATGATAATTCCGGATGCTGGTCGCCTGTTGGGAAAATTGGACGTGAGCAAACGATCAACTTGCAGAACGCGTGCTTGCTTCGAGTCGGCACAGTTATTCACGAAATTCTTCACGCTATCGGATTCTATCACGAGCAGAGCAGAAGTGATCGTGACCAATACGTCAAAATTATGAACGAAAACATTGCGAGCGATAAACTTGCTAATTTTGTGAAACTCAATAGCGATGAGGATGAAACGTTCAACATTTCTTATGATTATGAAAGTGTGCTTCACTACTCACCGAATGCATTTTCACAGAACGGCTTGCCGACTATCGTTAGCTTGAAACCGGGCAAAACTGAGCTCATGGGCCAACGTTTAGGATTGAGTGAAAAAGATGTTCAGAAAATCAAGAAAATGTATTGTAAAAAT
Protein: 223 (aa)
MKYKVGNPEEQGNYFEGDIILNLDQRNGVRLPTQRWENGIIPYKISKSFTIKQKNVISDAIDEIQSKTCIKLRPRAGEKDYVSFENDNSGCWSPVGKIGREQTINLQNACLLRVGTVIHEILHAIGFYHEQSRSDRDQYVKIMNENIASDKLANFVKLNSDEDETFNISYDYESVLHYSPNAFSQNGLPTIVSLKPGKTELMGQRLGLSEKDVQKIKKMYCKN
| Type | Start | End | Length |
| CDS |
33715 |
34235 |
521 |
| CDS |
34291 |
34438 |
148 |
| intron |
34236 |
34290 |
55 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001999174 |
GI24365 [Drosophila mojavensis] gb|EDW14635.1| GI24365 [Drosophila mojavensis] |
3e-58 |
| InterPro |
IPR024079 |
Metallopeptidase, catalytic domain |
|
| InterPro |
IPR001506 |
Peptidase M12A, astacin |
|
| InterPro |
IPR006026 |
Peptidase, metallopeptidase |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0008237 |
metallopeptidase activity |
|
| Gene Ontology(MF) |
GO:0004222 |
metalloendopeptidase activity |
|
| Gene Ontology(MF) |
GO:0008270 |
zinc ion binding |
|
| Pfam |
PF00413.19 |
Matrixin |
0.037 |
| Pfam |
PF01400.19 |
Astacin (Peptidase family M12A) |
1.4e-63 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ017891 |
| N. vitripennis |
NV19008-PA |
| H. sapiens |
ENSP00000269202 |
| A. mellifera |
GB19474-PA |
| P. humanus |
PHUM267360-PA |
| D. melanogaster |
FBgn0030947 |
| M. musculus |
ENSMUSG00000023914 |
| P. vanderplanki |
Pv.09501 |
| H. sapiens |
ENSP00000463280 |
| S. invicta |
SI2.2.0_03511 |
| H. sapiens |
ENSP00000230588 |
| A. aegypti |
AAEL001330 |
| M. musculus |
ENSMUSG00000024313 |