MidgeBase gene description page [Pn.11579]
Outline
| Gene ID | Pn.11579 |
| Type | Protein coding gene |
| Scaffold | PnScaf13871 |
| Start | 5687 |
| End | 7682 |
| Direction | - |
Sequence
Transcript: 1539 (bp)
ATGTCAAGATTATCGAAAAAAAGTTTCTTTCAGCACACGGCTTGTGTCTCTCGGCGCTTGTTTGCGACGACGTCACGCGACCTTGGAAGCCAATTGAAGTCGTTTTCGGAGGTGCCTGCAATTTCGGGTCTGAAAGTCATTCTCGGAAATCTGCCGGGCGGAAAGTATTATGGAAAATCGATGAAGGAATTGCATCAGTCGTTTCGCGCGGATTACGGCTCGCTGGTCCGCTTTCCGGGACTGTTCGGGAGACCTCCTGTAGTCTTTTCTTATGACGCGCGAGATTTCGAAACGACATACAGAAACGAGGGCGTATGGCCCGAGAGGCTAAATCTCGACTCACTGGTGTACTATCGAAAGTCCAAGCGCCCCGACATCTACGGCAAGTATGCCGGCTTGTTTTCGTCGCAGGGCGAGGAATGGCAGTCAATGAGGACAATTACAAATCCGATTCTGATGCAGCCCAAGACAATGAAACTCTATTGCGAGCAAGTGGACGAGATTGCGAAGGAGTTTGTGGGAAGAATGAAGGAATGGCGCGACGAGAAAGACGAAATGCCGGCCGACTTCGGAAACCGAATAAACTCGTGGTCGCTCGAGTCGGTCGTGGCCGTTGCTCTGGAGAAGAGGCTGAATCTTTTGAGCGGATCCTCAAACGACCCGAGAGCAGAGGAGCTCATCAAGAACATCCGAATTTTCTTCGAAAAGTCCTTCGAATTCGACGGACTTCCGTCTGTGTGGAAGTACTACGAGACGAAAGCCTTCAAGGAGTTCTTCAAGGTCTACGACGTGATTACCAACATCGTCATGCACTACATCGAAGAGGCGATCCAAAATATCGAGTCCAAGTCCGCGTCAAGCGCCGACGACCATGAGGACGGAGTGCTGCGTAAATTGCTGAGGATTGACAAGCGAGTTGCCGTTGTGATGGCGAGTGATATGCTTTTGGCTGGCGTTGACACGACCGCTACAGCCGTTATCAACACGCTCTACTGCCTCGCAAAGAACCAGGACAAGCAGGAGATTCTTCGGCAGGAACTGGTGCAAATCCTGCCCGCAGAAAATGCGCAGTTGACAGCAGAAAATATGAAAAATATGCCATATTTGAGGGCAGTGATTAAGGAGACCTTCCGACTCATGCCAGTCATCAGCGGCACTGCCCGGAGGCTAGTAAACGATGCAACTTTGTCGGGTTACAAAGTGCCGTCGGGCACGCACGTCGTGATGGTTCCGTTCTTCGAAACAAAGGACGCAAAGCAGTACGCACAGCCAGAAAAGTTCATTCCCGAAAGATGGCTGAGGACCAACAATGATCCGCAATGTCCACACGCAAAGTCTGCAAATCCATTTACGTTCTTGCCCTTTGGATTCGGCAGCCGAATGTGCATCGGTCGACGCTTGGCCGAACTGGAGATGGAAGTTTTCATTGCAAATGTCGTTCGAAATTTCAGGCTTGACTGGCCGCATCCGGACATGCAAGTCAAAAACACCTTCATCAACTTTCCCGTGTCCGATTTGAAATTTAGAGTCACCGACATC
Protein: 513 (aa)
MSRLSKKSFFQHTACVSRRLFATTSRDLGSQLKSFSEVPAISGLKVILGNLPGGKYYGKSMKELHQSFRADYGSLVRFPGLFGRPPVVFSYDARDFETTYRNEGVWPERLNLDSLVYYRKSKRPDIYGKYAGLFSSQGEEWQSMRTITNPILMQPKTMKLYCEQVDEIAKEFVGRMKEWRDEKDEMPADFGNRINSWSLESVVAVALEKRLNLLSGSSNDPRAEELIKNIRIFFEKSFEFDGLPSVWKYYETKAFKEFFKVYDVITNIVMHYIEEAIQNIESKSASSADDHEDGVLRKLLRIDKRVAVVMASDMLLAGVDTTATAVINTLYCLAKNQDKQEILRQELVQILPAENAQLTAENMKNMPYLRAVIKETFRLMPVISGTARRLVNDATLSGYKVPSGTHVVMVPFFETKDAKQYAQPEKFIPERWLRTNNDPQCPHAKSANPFTFLPFGFGSRMCIGRRLAELEMEVFIANVVRNFRLDWPHPDMQVKNTFINFPVSDLKFRVTDI
| Type | Start | End | Length |
| CDS |
5690 |
5849 |
160 |
| CDS |
5917 |
6332 |
416 |
| CDS |
6395 |
6408 |
14 |
| CDS |
6465 |
6613 |
149 |
| CDS |
6674 |
6949 |
276 |
| CDS |
7011 |
7240 |
230 |
| CDS |
7317 |
7380 |
64 |
| CDS |
7453 |
7682 |
230 |
| intron |
5850 |
5916 |
67 |
| intron |
6333 |
6394 |
62 |
| intron |
6409 |
6464 |
56 |
| intron |
6614 |
6673 |
60 |
| intron |
6950 |
7010 |
61 |
| intron |
7241 |
7316 |
76 |
| intron |
7381 |
7452 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001855599 |
cytochrome P450 [Culex quinquefasciatus] gb|EDS34543.1| cytochrome P450 [Culex quinquefasciatus] |
1e-129 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF09307.5 |
CLIP, MHC2 interacting |
0.058 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.6e-78 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04297 |
| Pn.11577 |
| Pn.11578 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02985 |
| P. vanderplanki |
Pv.02623 |
| D. plexippus |
DPOGS214443PA |
| P. vanderplanki |
Pv.01930 |
| P. vanderplanki |
Pv.05924 |
| P. vanderplanki |
Pv.01729 |
| H. sapiens |
ENSP00000258415 |
| D. melanogaster |
FBgn0034387 |