MidgeBase gene description page [Pn.11578]
Outline
| Gene ID | Pn.11578 |
| Type | Protein coding gene |
| Scaffold | PnScaf13871 |
| Start | 3354 |
| End | 5370 |
| Direction | - |
Sequence
Transcript: 1419 (bp)
ATGCCGAGGCTGAAGATTCTCTTTGGAAACATGCCGGGCGGCAAGTACTACGGCAAGTCGTTTCTGCAAATGCACAAACTATTCAACGCGGAGTTTGGGCCGATTTTGAAAGCTAAAGGAATGCTCGGCATTCCGCCGGCCGTTCTGACTTACGACGCGAGGGATTTTGAGAAGGCGTTTAGAAACGAGGGAACATGGCCATTTCGGCGAAATTTGGACTCGCTCGTCTACTACCGCGAAAAGAAGCGCCCCGAGATCTACGAGGAGTATAGCGGTCTATTTTCGTCGCAGGATGAAAAGTGGCACAAAACGAGAACAATCACCAATCCCATCATGATGCAGCCGAAGACAATGAAGCTCTACTGCAAGCAGGTCGACGAAATCGCAAAGGAATTTGTGGGCATAATGAGGAAATTGCGAGATGAGCGAAGCGAAATGCCCGCGGACTTTGGAAACTTTGTCAACGCGTGGTCGCTGGAATCGATAGCAGCTGTGGCGCTCGAAAGGCGATTGAATATTCTGAGCGGGACATCAAACGACCCCCATGCCCAGGAACTCATCAACAGCATTCGGGTGTTCTTCGAAAAGTCCTTTGATTTCGACGGATTGCCGCACATCTGGCGCATCTATCAGACGAGAGCGTTCAAAGAGTTCCTCGGCGTGTACGACAAAATGACCGACATCATTCTGCACTACATTGAGGAGGCGATCGAGAGAATAGAGAGTGCAGAAGAGGCGTTGAACGAGGAGCAGGACGGAATTTTGAGGAAGTTACTGAAAATTGACAAGAAGGTCGCTGTCGTTATGGCGAATGATATGCTGCTTGCTGGCGTTGACACGACAGCGACAGCGGCAATAAACACTCTCTACTGCCTCGCGAAAAATCAAGACAAGCAGGAGAGTCTTCGCGAGGAGCTCCTGAAAATTATGCCCAACAAAGACGTGCAGTTGACAGCCGAGAGCATGAGAAACATGCCTTATTTGCGAGCGGTTATTAAGGAAGCTTTTCGAGTGATGCCCGTCGTTAATGCCAACGTTCGTCGACTGAAAGCCGACACAGTTTTGTCGGGCTACAAAGTCCCAGCCGGCACCGACGTGGCAATGATTCCGCTGTTCGAACTGACCAACCCGAAACAGTATCCAGAGCCTGAAAAATTCATACCTGAGCGCTGGCTGCGCGAGACAAGCGCCGACTCTCAGTGTCCGAATGCCAAAACTGCCAATCCATTCACGTTTCTTCCCTTTGGCTTTGGCAGCAGAATGTGCATCGGACGGCGCTTGGCAGAGCTCGAGTTGGAAGTCTTGTTGACAAATGTCATTAGGAACTTCAGAGTCGAGTGGCCTCACGATGACTTGCAAGTCAAGAGCACGTTTATCAACATACCGATATCGAACTTGAAATTTAAAGTTACAGATGTG
Protein: 473 (aa)
MPRLKILFGNMPGGKYYGKSFLQMHKLFNAEFGPILKAKGMLGIPPAVLTYDARDFEKAFRNEGTWPFRRNLDSLVYYREKKRPEIYEEYSGLFSSQDEKWHKTRTITNPIMMQPKTMKLYCKQVDEIAKEFVGIMRKLRDERSEMPADFGNFVNAWSLESIAAVALERRLNILSGTSNDPHAQELINSIRVFFEKSFDFDGLPHIWRIYQTRAFKEFLGVYDKMTDIILHYIEEAIERIESAEEALNEEQDGILRKLLKIDKKVAVVMANDMLLAGVDTTATAAINTLYCLAKNQDKQESLREELLKIMPNKDVQLTAESMRNMPYLRAVIKEAFRVMPVVNANVRRLKADTVLSGYKVPAGTDVAMIPLFELTNPKQYPEPEKFIPERWLRETSADSQCPNAKTANPFTFLPFGFGSRMCIGRRLAELELEVLLTNVIRNFRVEWPHDDLQVKSTFINIPISNLKFKVTDV
| Type | Start | End | Length |
| CDS |
3357 |
3516 |
160 |
| CDS |
3579 |
3997 |
419 |
| CDS |
4066 |
4079 |
14 |
| CDS |
4147 |
4292 |
146 |
| CDS |
4490 |
4765 |
276 |
| CDS |
4837 |
5066 |
230 |
| CDS |
5126 |
5189 |
64 |
| CDS |
5261 |
5370 |
110 |
| intron |
3517 |
3578 |
62 |
| intron |
3998 |
4065 |
68 |
| intron |
4080 |
4146 |
67 |
| intron |
4293 |
4489 |
197 |
| intron |
4766 |
4836 |
71 |
| intron |
5067 |
5125 |
59 |
| intron |
5190 |
5260 |
71 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001855599 |
cytochrome P450 [Culex quinquefasciatus] gb|EDS34543.1| cytochrome P450 [Culex quinquefasciatus] |
1e-129 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF01544.13 |
CorA-like Mg2+ transporter protein |
0.04 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
2.4e-79 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04297 |
| Pn.11579 |
| Pn.11577 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02985 |
| P. vanderplanki |
Pv.02623 |
| D. plexippus |
DPOGS214443PA |
| P. vanderplanki |
Pv.01930 |
| P. vanderplanki |
Pv.05924 |
| P. vanderplanki |
Pv.01729 |
| H. sapiens |
ENSP00000258415 |
| D. melanogaster |
FBgn0034387 |