MidgeBase gene description page [Pn.11577]
Outline
| Gene ID | Pn.11577 |
| Type | Protein coding gene |
| Scaffold | PnScaf13871 |
| Start | 264 |
| End | 2199 |
| Direction | - |
Sequence
Transcript: 1470 (bp)
ATGTTGAGAAAATTGATTGTGAATCAGTCGCTCATTATCTCAAAACGCGCATTTTGTGCTGCGTCATTAAACCTTGAAAATCAATCGAGTGCGGGCAAGCCGTATTCGGAGGTGCCGAAAATTTCGGGCCTCAAAATCGTTTCACGGAGTCTTCCAGGCGGAAGATTCTTCAACAAGTCTCTGCGGGAAATTCACAAGATATTGCACGCAGAGTATGGCAACATCGTGGAGTTTGCCGGCTTATTTGGAAGGCCGACGCTTCTGTTCTGTTACGATGCAAGGGACTTTGAAAAGGTGCTGAGAGTCGAGGGCGTTTGGCCGGAGAGAATTGCCCTCGACTCGCTTGCCTACTACAGAAAGACTCAGCGTCCGGACATCTACGAAAAGTATCCGGGTTTGTTCTCCGCCCAAGGCGAGGAGTGGCACAAAATGAGGACAATAACGAATCCAATCTTGATGCAACCGAAGACCATTAAACTCTACTGCTCGCAAATCGACGCCATCGCAAAGGAGTTTGTTGAGATAATGAAAAGCTTAAGGGACAGCGAAACCAGCGAGATGCCCGCAGACTTCAGCAACAGCATCAACTCATGGTCGCTCGAGTCGATTGTTGCCATAGCGCTGGAGCGCCGCTTGAACATCATAGGGGGAGCGTCGAACGATGCGAAAGCCGAAGAGCTCATCAAGAACATCCGGCTGTTTTTTGAAAAATCGTTCCTGTACGACGCTCTACCGTCAGTATGGCGCTATTACCAGACAAAGGGATTCAAGGAATTCCTCAAAGTCTACGACAAAATAACAGAAATTGTTTTGCATTACATCGACATTGCAGTGAGGGAAATGGAAGCGAGCTCGGCAACCGTATCGGATGACCATGAGGACGGAATTTTGCGAAAATTACTGAAGGTTGATAAAGAGGCGGCTGTCGTGATGGCGAGTGATATGCTGCTAGCTGGCGTTGACACGGAAGTAAGTGGGATTCTGCCCGAGAAGGATTCGAAGCTGACGGCAGATAATATGAAGAATATGCCATACTTGAGGGCCGTAATAAAAGAATCATTCCGACTCTTTCCCGTCGTCAGCGGAACGGCACGAATGACAAAGAAGGAGGTCACCTTATCGGGCTACAGCGTTCCCGAGGGCAAGCATGTCATCATGGTGCCGCTCTTTGAATTAGAAAACGACAAACAGTATTCGCAAGCGAGCAAATTCTTGCCTGAGCGATGGCTGCGCGACAACAATGATCCGCAGTGTCCACACGCTAAGCAAGCTCATCCATTCACGTTTCTTCCATTTGGCTTCGGCAGCAGAATGTGCATCGGAAGACGTCTGGCCGAGCTGGAAATGGAGGTTCTCGTCGCGAACGTCATAAGGAATTTCAAGCTCGAGTGGTATCATCCAGACATGCAATACAAAAGTACATTCGTGAACATTCCGATTTCTGATTTAAAGTTCAAAGTCAGTGACGTC
Protein: 490 (aa)
MLRKLIVNQSLIISKRAFCAASLNLENQSSAGKPYSEVPKISGLKIVSRSLPGGRFFNKSLREIHKILHAEYGNIVEFAGLFGRPTLLFCYDARDFEKVLRVEGVWPERIALDSLAYYRKTQRPDIYEKYPGLFSAQGEEWHKMRTITNPILMQPKTIKLYCSQIDAIAKEFVEIMKSLRDSETSEMPADFSNSINSWSLESIVAIALERRLNIIGGASNDAKAEELIKNIRLFFEKSFLYDALPSVWRYYQTKGFKEFLKVYDKITEIVLHYIDIAVREMEASSATVSDDHEDGILRKLLKVDKEAAVVMASDMLLAGVDTEVSGILPEKDSKLTADNMKNMPYLRAVIKESFRLFPVVSGTARMTKKEVTLSGYSVPEGKHVIMVPLFELENDKQYSQASKFLPERWLRDNNDPQCPHAKQAHPFTFLPFGFGSRMCIGRRLAELEMEVLVANVIRNFKLEWYHPDMQYKSTFVNIPISDLKFKVSDV
| Type | Start | End | Length |
| CDS |
267 |
426 |
160 |
| CDS |
486 |
829 |
344 |
| CDS |
986 |
999 |
14 |
| CDS |
1058 |
1206 |
149 |
| CDS |
1271 |
1549 |
279 |
| CDS |
1611 |
1840 |
230 |
| CDS |
1906 |
2199 |
294 |
| intron |
427 |
485 |
59 |
| intron |
830 |
985 |
156 |
| intron |
1000 |
1057 |
58 |
| intron |
1207 |
1270 |
64 |
| intron |
1550 |
1610 |
61 |
| intron |
1841 |
1905 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660726 |
cytochrome P450 [Aedes aegypti] gb|EAT46804.1| cytochrome P450 [Aedes aegypti] |
1e-119 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002403 |
Cytochrome P450, E-class, group IV |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Gene Ontology(MF) |
GO:0004497 |
monooxygenase activity |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
3.6e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04297 |
| Pn.11579 |
| Pn.11578 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02985 |
| P. vanderplanki |
Pv.02623 |
| D. plexippus |
DPOGS214443PA |
| P. vanderplanki |
Pv.01930 |
| P. vanderplanki |
Pv.05924 |
| P. vanderplanki |
Pv.01729 |
| H. sapiens |
ENSP00000258415 |
| D. melanogaster |
FBgn0034387 |