MidgeBase gene description page [Pn.11562]
Outline
| Gene ID | Pn.11562 |
| Type | Protein coding gene |
| Scaffold | PnScaf13828 |
| Start | 2025 |
| End | 2894 |
| Direction | - |
Sequence
Transcript: 672 (bp)
ATGCGCTTTCTACTCACCATTTTAATGAATGTGACCACAATTGTTGAAAACTTTGATTCGCTCATCAATTACAAACAGCCAATCTTCTGGGCGGCCATCATCCATGTGATTTTCAACCCAATCTTTTGGAATGTTACCGGTCGTTTGGAGAACAGAACGCAAATTTTCTCACGAATTTGTGGCAATTCAAAGCACAGAGCTTGCTACATCTTTGCTTTTGTGACATTCACGCTCGGACTTACGCGCGATTACCTCGTCGTTTCTGCCTTAGCTATGCAACCAAAAATTACAGATTTCCTTAGCTACTACATGAACATCAACACACCGACAGACCTGTTTCAAAGCATCGGCACGATAGCCTTGATTTGGGGCTCGATCTTGGTCTTGACCTCAATGTACAGACTGGGAATCACTGGAACGTATCTCGGTGACTATTTTGGAATTTTCATGAACGAGAGAGTCACTGCCTTTCCCTACAACTTCTATGACAACCCAATGTATGTCGGCTCATCGTTCTGCTTCTTCGGACACGCTTTGAGAAGTTTGACCGCGTCCGGACTCCTCATTGCTGCCATCGTATGGCTCGTCTACAAAATTGCCATTATGTTTGAGGGTCCCTTTACCGCCAAGATTTTCGCCGAAAAGGAGTTGAAGGAATCAAAGAAGGTTCAT
Protein: 224 (aa)
MRFLLTILMNVTTIVENFDSLINYKQPIFWAAIIHVIFNPIFWNVTGRLENRTQIFSRICGNSKHRACYIFAFVTFTLGLTRDYLVVSALAMQPKITDFLSYYMNINTPTDLFQSIGTIALIWGSILVLTSMYRLGITGTYLGDYFGIFMNERVTAFPYNFYDNPMYVGSSFCFFGHALRSLTASGLLIAAIVWLVYKIAIMFEGPFTAKIFAEKELKESKKVH
| Type | Start | End | Length |
| CDS |
2028 |
2085 |
58 |
| CDS |
2157 |
2231 |
75 |
| CDS |
2297 |
2811 |
515 |
| CDS |
2871 |
2894 |
24 |
| intron |
2086 |
2156 |
71 |
| intron |
2232 |
2296 |
65 |
| intron |
2812 |
2870 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
CCF60612 |
hypothetical protein KAFR_0K02560 [Kazachstania africana CBS 2517] |
9e-47 |
| InterPro |
IPR024960 |
Phosphatidylethanolamine N-methyltransferase/Methylene-fatty-acyl-phospholipid synthase |
|
| InterPro |
IPR007318 |
Phospholipid methyltransferase |
|
| Gene Ontology(BP) |
GO:0006644 |
phospholipid metabolic process |
|
| Gene Ontology(MF) |
GO:0008170 |
N-methyltransferase activity |
|
| Pfam |
PF04191.8 |
Phospholipid methyltransferase |
2.2e-28 |
| Pfam |
PF13105.1 |
Protein of unknown function (DUF3959) |
0.26 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000379129 |
| H. sapiens |
ENSP00000379128 |
| M. musculus |
ENSMUSG00000000301 |
| P. vanderplanki |
Pv.11200 |
| H. sapiens |
ENSP00000391288 |
| H. sapiens |
ENSP00000255389 |
| H. sapiens |
ENSP00000379127 |