MidgeBase gene description page [Pn.11505]
Outline
| Gene ID | Pn.11505 |
| Type | Protein coding gene |
| Scaffold | PnScaf13632 |
| Start | 4802 |
| End | 6052 |
| Direction | + |
Sequence
Transcript: 1248 (bp)
ATGAGAGTGTGCGTTGTGGGAGCTGGAGCGGCCGGAATTTGTGCGGTCAAGCACTGTCTGCAGCGGAACATCGACGTAATTGCATTTGAGCAGGCGAGTGAGATCGGCGGAACGTGGATTTACACCGAAAACGTCGGCGAGAACGTTCACTCGAGCATGTATCGCAATCTCCACACGAACCTGCCAAAGGAGCTCATGTCCTTCCCGGACTTTCCGTTTCCCGCGCACGAGCGATCCTTTCTGCCGGCCCGCGACGTCCTCGCGTACCTGAATCTCTACGCCGACACATTCCGAGTGCGCGACAAAGTCAAGTTTCAGCACTGCGTCGTGCGCATTCGTCCGAGGATAATTGATGACGCGTGGGAAGTGATTGTGCGGAATTTAATTACCGAAATCGACGAGACGTTTGTCTTCGATTACATTCTGCTGTGCAACGGGCACTTTAGCGTGCCGCACATTCCAAAGTTCGAAGGTCGCGACACGTTTCGGGGGCGCCAGATTCACTCGCACGCATATCGAGTGCCCGAGGCGTTCGCGAAGGAGCGCGTCCTCGTCGTCGGCGCCGGTCCGAGTGGATTTGATCTGACACAGGAAATCGCCACGCAAGCAGGACATGTGCTGTGGTCGCACCACCTCAAGCAGCATGTAAACTTGAGAAACGTCGAGAATGTCACGCAGAAGCCAGACGTCGCGTGGTTCACGGAGGACGGTGCAATTTTCAAGGACGGGACGCGTGAAAGTTTCCAGAGCGTCGTCTACTGCACAGGCTACGAGTTCACCTTTCCATTCCTGTCGGTCGACTCGCAGCTGAGCTCCTACCAAAACTACATTCAGCCGCTCTACAAGCACTGCATCAACATAAATCGCCCCTCGCTCGCCATTGTGAGTCTCATCACTCAGAACTGTCCCTTTCAGACGTTTGATCTTCAGCTCCGATTCTGTCTCAAGCATTTCACGGGCGAGAAAGCTCTTCCGTCACGAGAGGAGATGCTCGCCGACACCGAGCGCGATATGAGTGAGCGATGGTCGAGGGGCTTGAGCCGGCGAAAGGCGCACTCGCTTGGCACGGGCGTTCAAGAGAAATACTACGAAGATCTGGCGCGCACGGCCGATATCGCGCCCATCAAGCCGTATGTCACGAAAATGTACAACCAGACACGGACCAATGCGATGCGCGACATTGCCACATTCCGGAACTATAAATTCACAATTATCGACGATGAAAATTTCGAAGCCACATTAATGCCA
Protein: 416 (aa)
MRVCVVGAGAAGICAVKHCLQRNIDVIAFEQASEIGGTWIYTENVGENVHSSMYRNLHTNLPKELMSFPDFPFPAHERSFLPARDVLAYLNLYADTFRVRDKVKFQHCVVRIRPRIIDDAWEVIVRNLITEIDETFVFDYILLCNGHFSVPHIPKFEGRDTFRGRQIHSHAYRVPEAFAKERVLVVGAGPSGFDLTQEIATQAGHVLWSHHLKQHVNLRNVENVTQKPDVAWFTEDGAIFKDGTRESFQSVVYCTGYEFTFPFLSVDSQLSSYQNYIQPLYKHCININRPSLAIVSLITQNCPFQTFDLQLRFCLKHFTGEKALPSREEMLADTERDMSERWSRGLSRRKAHSLGTGVQEKYYEDLARTADIAPIKPYVTKMYNQTRTNAMRDIATFRNYKFTIIDDENFEATLMP
| Type | Start | End | Length |
| CDS |
4802 |
6049 |
1248 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_311551 |
AGAP010398-PA [Anopheles gambiae str. PEST] gb|EAA07252.4| AGAP010398-PA [Anopheles gambiae str. PEST] |
1e-120 |
| InterPro |
IPR000960 |
Flavin monooxygenase FMO |
|
| InterPro |
IPR020946 |
Flavin monooxygenase-like |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0050661 |
NADP binding |
|
| Gene Ontology(MF) |
GO:0050660 |
flavin adenine dinucleotide binding |
|
| Gene Ontology(MF) |
GO:0004499 |
flavin-containing monooxygenase activity |
|
| Pfam |
PF01266.19 |
FAD dependent oxidoreductase |
0.00069 |
| Pfam |
PF01494.14 |
FAD binding domain |
0.012 |
| Pfam |
PF07992.9 |
Pyridine nucleotide-disulphide oxidoreductase |
5.4e-11 |
| Pfam |
PF01134.17 |
Glucose inhibited division protein A |
0.14 |
| Pfam |
PF00743.14 |
Flavin-binding monooxygenase-like |
9.7e-68 |
| Pfam |
PF12831.2 |
FAD dependent oxidoreductase |
0.026 |
| Pfam |
PF13450.1 |
NAD(P)-binding Rossmann-like domain |
1.3e-07 |
| Pfam |
PF13434.1 |
L-lysine 6-monooxygenase (NADPH-requiring) |
3.4e-08 |
| Pfam |
PF13738.1 |
Pyridine nucleotide-disulphide oxidoreductase |
2.1e-25 |
| Pfam |
PF00890.19 |
FAD binding domain |
0.026 |
| Pfam |
PF03486.9 |
HI0933-like protein |
3.6e-05 |
| Pfam |
PF13454.1 |
FAD-NAD(P)-binding |
1.2e-08 |
| Pfam |
PF01946.12 |
Thi4 family |
7.7e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.12567 |
| Pn.16015 |
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000356723 |
| H. sapiens |
ENSP00000416011 |
| P. vanderplanki |
Pv.01794 |
| S. invicta |
SI2.2.0_12134 |
| D. melanogaster |
FBgn0034943 |
| C. quinquefasciatus |
CPIJ013724 |
| P. vanderplanki |
Pv.01796 |
| H. sapiens |
ENSP00000439500 |
| N. vitripennis |
NV13474-PA |
| H. sapiens |
ENSP00000356729 |
| A. aegypti |
AAEL000797 |
| D. plexippus |
DPOGS201154PA |
| H. sapiens |
ENSP00000346901 |
| D. plexippus |
DPOGS211293PA |
| M. musculus |
ENSMUSG00000051081 |
| H. sapiens |
ENSP00000358277 |
| H. sapiens |
ENSP00000254090 |
| C. quinquefasciatus |
CPIJ013723 |
| M. musculus |
ENSMUSG00000026691 |
| A. aegypti |
AAEL000813 |
| M. musculus |
ENSMUSG00000028088 |
| B. mori |
BGIBMGA003927-TA |
| A. gambiae |
AGAP010398 |
| H. sapiens |
ENSP00000209929 |
| H. sapiens |
ENSP00000433742 |
| N. vitripennis |
NV10539-PA |
| H. sapiens |
ENSP00000462062 |
| H. sapiens |
ENSP00000406982 |
| H. sapiens |
ENSP00000356724 |
| S. invicta |
SI2.2.0_06569 |
| T. castaneum |
TC010110 |
| C. quinquefasciatus |
CPIJ013725 |
| M. musculus |
ENSMUSG00000095576 |
| A. mellifera |
GB15768-PA |
| P. vanderplanki |
Pv.08689 |
| H. melpomene |
HMEL003184-PA |
| H. sapiens |
ENSP00000444073 |
| M. musculus |
ENSMUSG00000040181 |
| H. sapiens |
ENSP00000385543 |
| T. castaneum |
TC010117 |
| M. musculus |
ENSMUSG00000026560 |
| M. musculus |
ENSMUSG00000086056 |
| A. gambiae |
AGAP010399 |
| T. castaneum |
TC016303 |
| H. sapiens |
ENSP00000405905 |
| T. castaneum |
TC010109 |
| A. mellifera |
GB13042-PA |
| P. vanderplanki |
Pv.01797 |
| H. sapiens |
ENSP00000236166 |
| A. aegypti |
AAEL000834 |
| D. melanogaster |
FBgn0033079 |
| H. sapiens |
ENSP00000375935 |
| P. humanus |
PHUM490630-PA |