MidgeBase gene description page [Pn.11452]
Outline
| Gene ID | Pn.11452 |
| Type | Protein coding gene |
| Scaffold | PnScaf13566 |
| Start | 1058 |
| End | 7952 |
| Direction | + |
Sequence
Transcript: 822 (bp)
ATGTTCGGATGTGCAGTCCTCATGTTCTCGCTCTTCGGCGAGCCTTTCGAGCGGGGCTTCTTCTGCAACGACGAGTCGCTACTCCATCCGCATCACACTTCAACTGTCAAGCACTGGATGCTGTTCCTCTTCGGCGTGGCCGTGCCGATAGTCTTAATCTTCCTCACAGAGCTTGCCCGTTCGAAGCGCAATTTGGACGAGGAGAGCGAGATAAAGTTCTTCAACTGGTCGATATCAGCATGCCAGCAAAATCTGTATAAATTCATTGGCGTGTTCCTCCTCGGCACGGCAAGCTGCCAGCTCTTAACCGACATCGGAAAATACTCGGTCGGCCGATTTCGACCGTATTTCATAACACTCTGTCAGCCGGTCTTAGCCGATAATACGACATGCAGCGACCCGAAGAACCTGCACCAGTACATTCTGGACTTTACCTGCGCCAATCCGGCAGTCACCGAGAAGATGCTAAAGGACATGCGGATGTCGTTTCCCAGCGCCAACTCGAGCTTCTCCTTCTTCACGATGACCTTCTGCGCGCTCTATGTGAATGCACGCTTCGAGTGGAATGGCACCAAGATTTTTAAGTATTTCCTCCAGTTCGTGCTGATCGCGGCAGCGTGGTTCACATCATTAAGCCGCATTTCAGACTATAAACATCACTGGTCGGACGTTCTGGCCGGCAGTGTTTTGGGCTTCCTCCTCGCAATTTTCGTCTGCCGCTACATGCTGAAGCTACACAAGCGTGAGAACTGTTCCAATTTGAAGTTACCGAGCACAAAATATGAATTAAGTACGCAACAGCAACAGAATGGGAATCAGATT
Protein: 274 (aa)
MFGCAVLMFSLFGEPFERGFFCNDESLLHPHHTSTVKHWMLFLFGVAVPIVLIFLTELARSKRNLDEESEIKFFNWSISACQQNLYKFIGVFLLGTASCQLLTDIGKYSVGRFRPYFITLCQPVLADNTTCSDPKNLHQYILDFTCANPAVTEKMLKDMRMSFPSANSSFSFFTMTFCALYVNARFEWNGTKIFKYFLQFVLIAAAWFTSLSRISDYKHHWSDVLAGSVLGFLLAIFVCRYMLKLHKRENCSNLKLPSTKYELSTQQQQNGNQI
| Type | Start | End | Length |
| CDS |
1058 |
1061 |
4 |
| CDS |
1278 |
1429 |
152 |
| CDS |
5151 |
5351 |
201 |
| CDS |
7347 |
7526 |
180 |
| CDS |
7591 |
7714 |
124 |
| CDS |
7789 |
7949 |
161 |
| intron |
1062 |
1277 |
216 |
| intron |
1430 |
5150 |
3721 |
| intron |
5352 |
7346 |
1995 |
| intron |
7527 |
7590 |
64 |
| intron |
7715 |
7788 |
74 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001658284 |
phosphatidate phosphatase [Aedes aegypti] gb|EAT41005.1| phosphatidate phosphatase [Aedes aegypti] |
7e-78 |
| InterPro |
IPR016118 |
Phosphatidic acid phosphatase/chloroperoxidase, N-terminal |
|
| InterPro |
IPR000326 |
Phosphatidic acid phosphatase type 2/haloperoxidase |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF11190.3 |
Protein of unknown function (DUF2976) |
0.012 |
| Pfam |
PF07695.6 |
7TM diverse intracellular signalling |
0.12 |
| Pfam |
PF06736.6 |
Protein of unknown function (DUF1211) |
0.087 |
| Pfam |
PF01569.16 |
PAP2 superfamily |
5.3e-20 |
| Pfam |
PF03631.10 |
Virulence factor BrkB |
0.38 |
| Pfam |
PF02673.13 |
Bacitracin resistance protein BacA |
0.012 |
| Pfam |
PF06930.7 |
Protein of unknown function (DUF1282) |
0.13 |
| Pfam |
PF14360.1 |
PAP2 superfamily C-terminal |
6.7 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.00104 |