MidgeBase gene description page [Pn.11404]
Outline
| Gene ID | Pn.11404 |
| Type | Protein coding gene |
| Scaffold | PnScaf13454 |
| Start | 703 |
| End | 1673 |
| Direction | + |
Sequence
Transcript: 858 (bp)
ATGGGACGCAAGCCACTTAGAAAGGATCGAACGATTGAAGGAGACGATAGCATTTCAAATAGTGAGGACGACAATCAGCCATCGACTTCGCGAGGAGCGCGGGAAAAAGCTTCAGCAAGTCAACGAGCGAGAAAAAATTATTCCGACGACGACAATAGTGACTATGAAGGAGGCAATAGAAGCGCTCAAAACACATTCAATACCCAAGCACAAGATGTGGACATCGAGCTTTTAGCCACGCAATTGGTCAAATACGCCATCAACCACTCGTACAGAAAAATTCCGATGAAACGACCCGACGTCCGCAAGCACCTAAACATTCCACAAAAAGAATTTCCACTAGTATTTACCGAGGCACAGGAGCTGCTGAGGTCAACATTTGGTCTCGAAATGGTGGAACTGAACGATTCAAAGTCCTCAAAACTGATTATCGTTTACTCTTCAATACCGGCAGTATCTCGGCTTCAGCTTAATCCACAAGAGGTTAAAGAAGCGCAGCTTCTCTTCATCATAATCTCGTACCTGTACATGAAATCCGTCGAGGTTCATGAAGAACATCTCAACCACTTTGTGGCGCAAATCGGCATCGACGTCGATGAATATACGAAGGCCAAGGAGCTGTTTGTGAAGCAGCTCTATCTGAAGCGAACGAAGCACGAAATCGAGGGAAGAAACGAGACGTACGTGACTGTAACGTGGGGCGAGCGAGCTCACCTGGAATTCAACAAGAAGGAGATGCTCAAGACTGTCGCTCAAATCATGGGGAAGTCCATGCAAATGTTTGTCACGCAATATCATGAGACTTTCGGCGACTCGGCTGTCTCAACGCAAATGCAAGAGTCAATGCTTGTCGACGAC
Protein: 286 (aa)
MGRKPLRKDRTIEGDDSISNSEDDNQPSTSRGAREKASASQRARKNYSDDDNSDYEGGNRSAQNTFNTQAQDVDIELLATQLVKYAINHSYRKIPMKRPDVRKHLNIPQKEFPLVFTEAQELLRSTFGLEMVELNDSKSSKLIIVYSSIPAVSRLQLNPQEVKEAQLLFIIISYLYMKSVEVHEEHLNHFVAQIGIDVDEYTKAKELFVKQLYLKRTKHEIEGRNETYVTVTWGERAHLEFNKKEMLKTVAQIMGKSMQMFVTQYHETFGDSAVSTQMQESMLVDD
| Type | Start | End | Length |
| CDS |
703 |
1000 |
298 |
| CDS |
1054 |
1308 |
255 |
| CDS |
1366 |
1670 |
305 |
| intron |
1001 |
1053 |
53 |
| intron |
1309 |
1365 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001655313 |
MAGE-41 protein, putative [Aedes aegypti] gb|EAT36535.1| MAGE-41 protein, putative [Aedes aegypti] |
6e-22 |
| InterPro |
IPR002190 |
MAGE protein |
|
| Pfam |
PF01454.14 |
MAGE family |
3.9e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA009056-TA |
| H. melpomene |
HMEL003620-PA |
| P. vanderplanki |
Pv.11039 |
| P. humanus |
PHUM126170-PA |
| M. musculus |
ENSMUSG00000070520 |
| D. plexippus |
DPOGS200986PA |
| H. sapiens |
ENSP00000330694 |
| C. quinquefasciatus |
CPIJ003760 |
| S. invicta |
SI2.2.0_05020 |
| N. vitripennis |
NV17878-PA |