MidgeBase gene description page [Pn.11255]
Outline
| Gene ID | Pn.11255 |
| Type | Protein coding gene |
| Scaffold | PnScaf13080 |
| Start | 36527 |
| End | 37290 |
| Direction | + |
Sequence
Transcript: 663 (bp)
ATGAAACTCAATGACGTGGTAGAAAATTTTGATGCGGTCACCACGAAGGGAAATTTCAAATTTTACGATTGGGCCGGTGACTCTTGGATCGTTCTCTTTAGCCACCCTGCGGACTTTACGCCGGTTTGCTCGACAGAATTGGGCAGAATTGCTGTCCATCAACATGAGTTCAAGAAACGCAACGTAAAAATTCTTGCCCACTCGATCGATTCGCTCAACGATCACGAGGAATGGGTCAACGATATCAGCAATTATTGTCAAGACATTTGCGGAGAGTTTCCCTTTCCGATCATCGCCGATCCCGATCGAAAGCTCGCAGTGAAATTCGGCATGCTGAACTCGGGCGAAAACGTTGATCCCGAAACTGCGAAAACTGTTCGTGCACTCTTTATCATCAGCCCCGATCACCGAGTGCGACTCATTCAAATCTACCCAGCCAGTACCGGCCGCAATGTCGATGAAATTTTGAGATGCATCGATTCGCTGCAGCTCGTGGATCGACTGAAGATCGTTGCAACACCCGCCAACTGGGTGCCCGGCGAAAAAGTAATGATTCTGCCGGATGCGGACGAGAAAAAGATCAAGCAGACGTTCGGAGACGACTTTGAAATCACATCGATGCCATCAAAGCGTGTTTACATAAGAACAACGACCAACTACAAA
Protein: 221 (aa)
MKLNDVVENFDAVTTKGNFKFYDWAGDSWIVLFSHPADFTPVCSTELGRIAVHQHEFKKRNVKILAHSIDSLNDHEEWVNDISNYCQDICGEFPFPIIADPDRKLAVKFGMLNSGENVDPETAKTVRALFIISPDHRVRLIQIYPASTGRNVDEILRCIDSLQLVDRLKIVATPANWVPGEKVMILPDADEKKIKQTFGDDFEITSMPSKRVYIRTTTNYK
| Type | Start | End | Length |
| CDS |
36527 |
36646 |
120 |
| CDS |
36745 |
37287 |
543 |
| intron |
36647 |
36744 |
98 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EGI64430 |
Peroxiredoxin-6 [Acromyrmex echinatior] |
8e-84 |
| InterPro |
IPR019479 |
Peroxiredoxin, C-terminal |
|
| InterPro |
IPR000866 |
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016209 |
antioxidant activity |
|
| Gene Ontology(MF) |
GO:0051920 |
peroxiredoxin activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF10417.4 |
C-terminal domain of 1-Cys peroxiredoxin |
1e-11 |
| Pfam |
PF13911.1 |
AhpC/TSA antioxidant enzyme |
0.0036 |
| Pfam |
PF00578.16 |
AhpC/TSA family |
9.9e-28 |
| Pfam |
PF08534.5 |
Redoxin |
3e-09 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL002309 |
| T. castaneum |
TC004948 |
| D. melanogaster |
FBgn0033518 |
| C. quinquefasciatus |
CPIJ011296 |
| N. vitripennis |
NV14100-PA |
| D. melanogaster |
FBgn0033520 |
| A. mellifera |
GB10498-PA |
| A. gambiae |
AGAP011824 |
| P. vanderplanki |
Pv.08740 |
| D. melanogaster |
FBgn0033521 |
| P. humanus |
PHUM316680-PA |
| S. invicta |
SI2.2.0_03768 |