MidgeBase gene description page [Pn.11248]
Outline
| Gene ID | Pn.11248 |
| Type | Protein coding gene |
| Scaffold | PnScaf13078 |
| Start | 6978 |
| End | 8630 |
| Direction | - |
Sequence
Transcript: 894 (bp)
ATGTTGCATCAGTTTTATGCATCGTGGCGCGACTTAATGGACAACAAGTCCGACCCGCGAGTCGCCGACTGGCCGCTCATGTCGTCGCCCATCCCGACGGTCGTCATTTGCCTCTGCTACGTGTACACGGTTAAGGTTCTCTTGCCGAAATTCATGGAGGACCGCAAGCCATACCGGCTGCGAAAGACAATCGTCATCTACAATCTGCTGCAGGCCATGTTCAGCTTTTATCTCTTCTTCGAGGAGGGCCGCATCTCGTGGCTGAGGCACTACAACTTTCGATGCCAGTCCGTTGACTTCTCCGACGACGAAATTGCAATGAGGATGGTGCGAGGATGCTGGTGGTACTTCTTCAGCAAGTTCACCGAGTTCTTCGACACTTTTTTCTTCGTGCTGAGGAAGCGCTTCGATCAGGTCTCGACCCTGCACGTCATCCACCACGGAATCATGCCCTTCAGCGTTTGGTGGGGCGTGAAGTTCATGCCGGGCGGCCACTGCACCTTTTTCGCCTTCCTCAACACCTTCGTGCACGTCGTGATGTACACGTACTACATGATTGCGGCCATCGGACCCGAGATGCAGAAATATCTTTGGTGGAAGAAATATCTGACGATCTTGCAGATGGTGCAATTCGTGGTGGTCTTCATCCATGCGTCTCAGCTCTTCTTCCACAATCCGTGCAACTATCCGATCGTCTTCGCCTACTGGATTGCCGGCCATGGCGTTCTCTTCCTGTGCCTGTTTGCAAACTTTTACAGAAAGGCCTACAAGAAAAATGAGGCGGGCGGTGAGGCGAGGAAGAGAATCGACTTGAACGGAAATGCAGTGAAAAGTGGAAAACTGATGGCGAACGGAAATGGCATTTTGACCAATGGCGACGCAAAGAAAACTAGT
Protein: 298 (aa)
MLHQFYASWRDLMDNKSDPRVADWPLMSSPIPTVVICLCYVYTVKVLLPKFMEDRKPYRLRKTIVIYNLLQAMFSFYLFFEEGRISWLRHYNFRCQSVDFSDDEIAMRMVRGCWWYFFSKFTEFFDTFFFVLRKRFDQVSTLHVIHHGIMPFSVWWGVKFMPGGHCTFFAFLNTFVHVVMYTYYMIAAIGPEMQKYLWWKKYLTILQMVQFVVVFIHASQLFFHNPCNYPIVFAYWIAGHGVLFLCLFANFYRKAYKKNEAGGEARKRIDLNGNAVKSGKLMANGNGILTNGDAKKTS
| Type | Start | End | Length |
| CDS |
6981 |
7414 |
434 |
| CDS |
7482 |
7617 |
136 |
| CDS |
8242 |
8430 |
189 |
| CDS |
8496 |
8630 |
135 |
| intron |
7415 |
7481 |
67 |
| intron |
7618 |
8241 |
624 |
| intron |
8431 |
8495 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_313358 |
AGAP003600-PA [Anopheles gambiae str. PEST] gb|EAA08894.4| AGAP003600-PA [Anopheles gambiae str. PEST] |
1e-103 |
| InterPro |
IPR002076 |
GNS1/SUR4 membrane protein |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01151.13 |
GNS1/SUR4 family |
4.5e-64 |
| Pfam |
PF06570.6 |
Protein of unknown function (DUF1129) |
0.16 |
| Pfam |
PF00501.23 |
AMP-binding enzyme |
0.034 |
| Pfam |
PF07884.9 |
Vitamin K epoxide reductase family |
2.4 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes