MidgeBase gene description page [Pn.11189]

Outline

Link to gbrowse

Gene ID Pn.11189
Type Protein coding gene
Scaffold PnScaf12913
Start 168
End 539
Direction +

Sequence

Transcript: 369 (bp)

 ATGCTGCTGGTGGAGACGATTCTGCACGCGAAGGGCTTCAGCCTGCGCGACTGGCTCGCCACCTACGACGACCTGCCCAACACGATAAAGAAGGTGAAGGTGCACGACCGCAACATCTTCGAGACGACCGACGCCGAGCGCATGTGCCTCAAGCCCGACGGCCTCCAAGCGAAGATCGACGAGCTCGTGCGGAAGTACAAGCGCGGCCGGTCGTTTGTGCGGCCGTCCGGCACCGAGGACGTCGTGCGCGTCTACGCCGAGGCCGAGAATGCCGACGACGTGCAGATGCTCGCGGCCGAGGTGAGCATCCTCGTCTACGAGATGGCCAATGGCGTCGGCGAGAAGCCCTCGATCCCGCAGCAGAAGTTT 

Protein: 123 (aa)

 MLLVETILHAKGFSLRDWLATYDDLPNTIKKVKVHDRNIFETTDAERMCLKPDGLQAKIDELVRKYKRGRSFVRPSGTEDVVRVYAEAENADDVQMLAAEVSILVYEMANGVGEKPSIPQQKF 
Type Start End Length
CDS 168 536 369

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_001661733 phosphoglucomutase [Aedes aegypti] gb|EAT36375.1| phosphoglucomutase [Aedes aegypti] 3e-39
InterPro IPR005843 Alpha-D-phosphohexomutase, C-terminal
InterPro IPR016657 Phosphoacetylglucosamine mutase
Gene Ontology(BP) GO:0005975 carbohydrate metabolic process
Gene Ontology(MF) GO:0004610 phosphoacetylglucosamine mutase activity
Gene Ontology(MF) GO:0016868 intramolecular transferase activity, phosphotransferases
Pfam PF00408.15 Phosphoglucomutase/phosphomannomutase, C-terminal domain 9.6e-12

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID

Orthologous genes

Species Gene ID
H. sapiens ENSP00000423389
H. sapiens ENSP00000421154