MidgeBase gene description page [Pn.11145]
Outline
| Gene ID | Pn.11145 |
| Type | Protein coding gene |
| Scaffold | PnScaf12855 |
| Start | 37321 |
| End | 39468 |
| Direction | + |
Sequence
Transcript: 2145 (bp)
ATGCCCGCAGATGCAGAAGTATTCCAATTTCAGGCTGAGATTGCTCAGCTCATGTCGTTGATCATCAACACCTTCTATTCAAATAAGGAAATTTTCTTGCGTGAATTGATCTCAAACTCGTCAGACGCTCTCGACAAAATCCGCTATGAGTCGCTCACGGATCCCTCGAAATTGGACTCTGGCAAGGAGCTCTACATCAAAATTATTCCCAACAAGGAGGCTCGCACTTTGACCCTCATCGATACTGGTATCGGCATGACAAAGTCCGATCTCGTGAATAACCTCGGTACGATTGCTCGCTCGGGCACAAAGGCCTTCATGGAAGCCCTGCAAGCTGGTGCTGATATCTCTATGATTGGTCAGTTCGGCGTCGGTTTCTACTCCGCTTACTTGGTAGCCGACAAGGTTACCGTGCACTCGAAGAACAACGACGACGAGCAATACGTGTGGGAGTCGTCGGCCGGCGGTAGCTTCACAATCACGCCCGATGATGGCGAGCCACTCGGCCGCGGCACAAAGATCGTCCTGCACATCAAGGAGGACCAGACCGAGTACTTGGAGGAGGCAAAGATCAAATCGATTGTCACGAAGCACTCGCAGTTCATTGGTTATCCAATCAAATTGGTGGTTGAGAAGGAGCGTGAAAAGGAGGTCAGCGATGACGAGGCCGAGCCCGAGGAGAAGGAGGAGAAGAAAGAGGAGGGTGATGAGCCAAAGATCGAGGACGTCGGCGACGACGAGGATGCTGATAAGGCTGATAAGGATAAGAAAAAGAAGACGGTCAAAGTGAAATACACCGAGGATGAGGAGCTCAACAAGACCAAGCCCATCTGGACTCGCAATCCCGATGACATCACCACCGAGGAGTACGGCGAATTCTACAAGAGCCTCACCAACGACTGGGAGGACCATTTGGCCGTCAAGCACTTCTCGGTTGAGGGTCAGCTCGAGTTCCGTGCGCTGCTCTTCATCCCGCGTCGCGTTCCATTCGATCTCTTCGAGGCCAAGAAGAAGAAGAACAACATCAAGCTGTACGTGCGCCGTGTCTTCATCATGGACAACTGCGAGGAACTCATCCCCGACTACTTGAACTTCATGAAGGGCGTCGTCGACTCGGAGGACTTGCCGCTGAACATTTCCCGTGAGATGCTCCAGCAGAACAAGATCCTCAAGGTCATCCGCAAGAACCTTGTCAAGAAGTGCTTGGAGCTGTTCGAGGAGTTGTCGGAGGACAAGGAGAACTACAAGAAGTTCTACAACCAGTTTAGCAAGAACTTGAAGTTGGGCGTCCACGAGGACTCGACCAACCGCGCCAAGTTGGCCGACTTGCTTCGCTTCCAGACTTCGGCCAGCGGCGACGAGAGCTGCTCGTTGGCTGACTACGTCGGTCGCATGAAGGAGAACCAAAAATCAATTTACTTCATCACTGGCGAGAGCAGAGAACAAGTCAGCAACTCGGCATTCGTTGAGCGCGTCAAGAAACGCGGCTTCGAAGTCGTCTACATGACCGAGCCCATCGACGAGTACGTCATCCAACAGCTGAAAGAATACCAAGGCAAGCAACTCGTGTGCGTCACCAAGGAGGGCTTGGAATTGCCAGAGGATGAGGAGGAGAAGAAGAAACGCGAGGAGGACAAGGCCAAGTTCGAGAATCTCTGCAAAGTCATGAAGTCCGTCTTGGACAACAAAGTCGAGAAGGTCATCGTGTCAAACCGCTTGGTCGAGTCGCCATGCTGTATCGTCACCTCTCAATATGGCTGGTCCGCAAACATGGAGCGCATCATGAAGGCACAGGCTCTCCGTGACACCACCACGATGGGCTACATGGCTGGCAAGAAGCATCTCGAAATCAACCCAGACCATCCGATCATCGAGACACTGCGCCAAAAGGCAGAGGCAGACAAGAACGATAAGGCTGTTAAAGATTTGTGCATTTTACTCTTCGAGACATCGCTCCTCAGCTCGGGCTTCTCGTTGGACGAACCGCAAGTTCATGCCGCTCGCATCTACAGAATGATCAAGCTCGGCTTGGGCATCGACGAGGATGAGCCAATGGCAACGGAAGAGGTTCCAGCTGCCGCCTCATCTGACATGCCACCACTCGTCGACGATGCAGAGGATGCGTCGCACATGGAGGAGGTCGAC
Protein: 715 (aa)
MPADAEVFQFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIKIIPNKEARTLTLIDTGIGMTKSDLVNNLGTIARSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVHSKNNDDEQYVWESSAGGSFTITPDDGEPLGRGTKIVLHIKEDQTEYLEEAKIKSIVTKHSQFIGYPIKLVVEKEREKEVSDDEAEPEEKEEKKEEGDEPKIEDVGDDEDADKADKDKKKKTVKVKYTEDEELNKTKPIWTRNPDDITTEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRVPFDLFEAKKKKNNIKLYVRRVFIMDNCEELIPDYLNFMKGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELSEDKENYKKFYNQFSKNLKLGVHEDSTNRAKLADLLRFQTSASGDESCSLADYVGRMKENQKSIYFITGESREQVSNSAFVERVKKRGFEVVYMTEPIDEYVIQQLKEYQGKQLVCVTKEGLELPEDEEEKKKREEDKAKFENLCKVMKSVLDNKVEKVIVSNRLVESPCCIVTSQYGWSANMERIMKAQALRDTTTMGYMAGKKHLEINPDHPIIETLRQKAEADKNDKAVKDLCILLFETSLLSSGFSLDEPQVHAARIYRMIKLGLGIDEDEPMATEEVPAAASSDMPPLVDDAEDASHMEEVD
| Type | Start | End | Length |
| CDS |
37321 |
39465 |
2145 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADM13380 |
heat shock protein 90 [Polypedilum vanderplanki] |
0.0 |
| InterPro |
IPR001404 |
Heat shock protein Hsp90 |
|
| InterPro |
IPR019805 |
Heat shock protein Hsp90, conserved site |
|
| InterPro |
IPR020575 |
Heat shock protein Hsp90, N-terminal |
|
| InterPro |
IPR020568 |
Ribosomal protein S5 domain 2-type fold |
|
| InterPro |
IPR003594 |
ATPase-like, ATP-binding domain |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(BP) |
GO:0006950 |
response to stress |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0051082 |
unfolded protein binding |
|
| Pfam |
PF13589.1 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
2.7e-11 |
| Pfam |
PF03896.11 |
Translocon-associated protein (TRAP), alpha subunit |
0.12 |
| Pfam |
PF02518.21 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
1.6e-10 |
| Pfam |
PF00183.13 |
Hsp90 protein |
8.9e-266 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL006610-PA |
| A. aegypti |
AAEL011708 |
| A. aegypti |
AAEL014843 |
| A. aegypti |
AAEL011704 |
| B. mori |
BGIBMGA012753-TA |
| A. gambiae |
AGAP006958 |
| H. sapiens |
ENSP00000396189 |
| P. humanus |
PHUM381600-PA |
| P. vanderplanki |
Pv.13218 |
| P. vanderplanki |
Pv.09451 |
| D. plexippus |
DPOGS206511PA |
| D. plexippus |
DPOGS213899PA |
| A. mellifera |
GB14758-PA |
| P. vanderplanki |
Pv.14038 |
| M. musculus |
ENSMUSG00000020048 |
| A. mellifera |
GB12703-PA |
| S. invicta |
SI2.2.0_11907 |
| A. aegypti |
AAEL012827 |
| N. vitripennis |
NV11936-PA |
| P. humanus |
PHUM581090-PA |
| C. quinquefasciatus |
CPIJ011246 |
| A. gambiae |
AGAP001424 |
| H. sapiens |
ENSP00000360709 |
| C. quinquefasciatus |
CPIJ011244 |
| H. sapiens |
ENSP00000216281 |
| N. vitripennis |
NV16579-PA |
| C. quinquefasciatus |
CPIJ015075 |
| D. melanogaster |
FBgn0039562 |
| D. melanogaster |
FBgn0001233 |
| T. castaneum |
TC012185 |
| H. sapiens |
ENSP00000335153 |
| H. melpomene |
HMEL006062-PA |
| S. invicta |
SI2.2.0_11884 |
| A. aegypti |
AAEL014845 |
| T. castaneum |
TC014606 |
| A. mellifera |
GB14494-PA |
| H. sapiens |
ENSP00000325875 |
| C. quinquefasciatus |
CPIJ002384 |
| N. vitripennis |
NV10003-PA |
| H. sapiens |
ENSP00000360609 |
| H. sapiens |
ENSP00000299767 |
| B. mori |
BGIBMGA004612-TA |