MidgeBase gene description page [Pn.11136]
Outline
| Gene ID | Pn.11136 |
| Type | Protein coding gene |
| Scaffold | PnScaf12836 |
| Start | 20768 |
| End | 21640 |
| Direction | - |
Sequence
Transcript: 810 (bp)
ATGTCTATTGTGAAGATCAAAAATCACGATGAAAATATTTTCAATATTGATGCGGAGGACGAGAAGGAAATTTCAACAAAGAAGCCATTGATGTACCGCTCAAAATATTCGAGAGCTATTTACGAAGCTGAGAAGAAGAGACAAGGTCAAAAACACTTGCAGCATAAAACCTTTGGCATGCCCGATGAGGTGGTAGCAATTTCGCCCCAACGGTTTCTCAAGAAAGGTGACGGAATTTATCGCTGCTTCGCTATTCGTCCCAAAACTATTCACATAGAGTGCACCTCACGTCGTCCCCCGGTTCCGAAGCATAATGAAATTAATGACTTTAGATCAGCTAAGAACAACAGTGATGAGGGTGAAAAAAATTTTAAACTTATTAACATAAAGCGGGTAAATTCGGCGGCAGTTGTGAAAGAGAAGCTCGGTCCAAAGTGCTTTGAGCAATCACCGCCGAAATACATTTACAAATCAAAGTTCGGGAAAGTTCCAAACTACTTGGTTAGAATGAATGAAGAAATAAAAAAATTGGAGGAATTGAGCTTAAGGGAAAAGGAGGAGAAGCAAAGAAAAGAGGAAAGCAAGAAAATTCGTGTTATAACTCAAGAAGAGAAGAATAAATTGCTTGAGGGACTGAAACATAATTGGCATAAGTTACAGGAGGAGTATCAGAAGATGCCTCTACTCATCGACTCAGTTCCGAAAACAATAAGGAAAACCAAACTGGAGGATAGTCTCAAAAGTTTGGAACGCGACATTTGCTTGCTCAACACGAGTTCAAGCAGAATATTCATAGTTGCCGAGGGATAC
Protein: 270 (aa)
MSIVKIKNHDENIFNIDAEDEKEISTKKPLMYRSKYSRAIYEAEKKRQGQKHLQHKTFGMPDEVVAISPQRFLKKGDGIYRCFAIRPKTIHIECTSRRPPVPKHNEINDFRSAKNNSDEGEKNFKLINIKRVNSAAVVKEKLGPKCFEQSPPKYIYKSKFGKVPNYLVRMNEEIKKLEELSLREKEEKQRKEESKKIRVITQEEKNKLLEGLKHNWHKLQEEYQKMPLLIDSVPKTIRKTKLEDSLKSLERDICLLNTSSSRIFIVAEGY
| Type | Start | End | Length |
| CDS |
20771 |
21488 |
718 |
| CDS |
21549 |
21640 |
92 |
| intron |
21489 |
21548 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR20698 |
hypothetical protein AND_19658 [Anopheles darlingi] |
8e-27 |
| Pfam |
PF13864.1 |
Calmodulin-binding |
3.9e-22 |
| Pfam |
PF10669.4 |
Protein gp23 (Bacteriophage A118) |
6.3 |
| Pfam |
PF00232.13 |
Glycosyl hydrolase family 1 |
0.09 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL004257 |
| M. musculus |
ENSMUSG00000026679 |
| H. melpomene |
HMEL013515-PA |
| S. invicta |
SI2.2.0_10838 |
| H. sapiens |
ENSP00000432930 |
| P. vanderplanki |
Pv.14297 |
| B. mori |
BGIBMGA002111-TA |
| H. sapiens |
ENSP00000365541 |
| H. sapiens |
ENSP00000331044 |
| T. castaneum |
TC010473 |
| P. humanus |
PHUM256930-PA |
| D. plexippus |
DPOGS203932PA |
| D. melanogaster |
FBgn0062517 |
| N. vitripennis |
NV14072-PA |
| A. aegypti |
AAEL004261 |
| A. gambiae |
AGAP007240 |
| C. quinquefasciatus |
CPIJ014869 |
| T. castaneum |
TC000155 |