MidgeBase gene description page [Pn.10991]
Outline
| Gene ID | Pn.10991 |
| Type | Protein coding gene |
| Scaffold | PnScaf12525 |
| Start | 58 |
| End | 1020 |
| Direction | + |
Sequence
Transcript: 444 (bp)
ATGTTTGAAGAAGAAATTTCCGATAGAATAAAGGAATTCAAGGATCTCAACTGTGAAGTAGTTGGAGTTTCTGTCGATTCGCATTTTTCGCATCTTGCATGGACAAATACAGAGCGAAAGAAAGGCGGCATTGGTCAAATTCAATATCCTCTATTGGCCGATTTGACAAAGAAGATTTCGTCAGACTATGGTGTTTTGATTGAAGAGGGCGGCATTTCACTCCGTGGCTTGTTCATAATTGATCCTAACTCAGTAGTTAGACAAATTACGATCAACGACCTTCCAGTGGGTCGAAGTGTAGATGAAACATTGCGCTTGATTCGAGCCTTTCAATTTGTTGAGAAGCACGGCGAAGTATGTCCAGCAAACTGGGACGAGAAGAAGAACAACAATACCATTAAGCCGGATCCAAAAGGTTCGCAAGAATACTTCAACAAAGTAAAT
Protein: 148 (aa)
MFEEEISDRIKEFKDLNCEVVGVSVDSHFSHLAWTNTERKKGGIGQIQYPLLADLTKKISSDYGVLIEEGGISLRGLFIIDPNSVVRQITINDLPVGRSVDETLRLIRAFQFVEKHGEVCPANWDEKKNNNTIKPDPKGSQEYFNKVN
| Type | Start | End | Length |
| CDS |
58 |
77 |
20 |
| CDS |
209 |
473 |
265 |
| CDS |
859 |
1017 |
159 |
| intron |
78 |
208 |
131 |
| intron |
474 |
858 |
385 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663718 |
peroxiredoxins, prx-1, prx-2, prx-3 [Aedes aegypti] gb|EAT34216.1| peroxiredoxins, prx-1, prx-2, prx-3 [Aedes aegypti] |
5e-67 |
| InterPro |
IPR019479 |
Peroxiredoxin, C-terminal |
|
| InterPro |
IPR000866 |
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016209 |
antioxidant activity |
|
| Gene Ontology(MF) |
GO:0051920 |
peroxiredoxin activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF10417.4 |
C-terminal domain of 1-Cys peroxiredoxin |
3.3e-12 |
| Pfam |
PF00578.16 |
AhpC/TSA family |
3.1e-21 |
| Pfam |
PF08534.5 |
Redoxin |
1.1e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes