MidgeBase gene description page [Pn.10986]
Outline
| Gene ID | Pn.10986 |
| Type | Protein coding gene |
| Scaffold | PnScaf12503 |
| Start | 36766 |
| End | 38981 |
| Direction | + |
Sequence
Transcript: 2136 (bp)
ATGAATAATGGACGCGGGTCGCCAGTATATGGCGACGACTACGTGAAAAGTTTGTACGCATCACATGAGAACGAGCAAAAAGTGACAAAACCAAGAAAGTTCCTGAAGCGACGAGAAAATTTCAGCTTATTTACGTACTTTTTCTTCATTATCATAAGAATTGCTCTCGTTTTCCTCCCACAATATGGCTACATTCATCCCGACGAGTTCTTTCAAACAACCGAGGTCATTACAGGCGAAGTGTTTGAACTCGAGGCAACGAGAACTTGGGAATTCAACAGCACCATGCCGATTAGGAGCTATGCAATTCCGTTTTTCTATCTAAAAATACCGATGGTGTTTCTCAAATTCATCCTCATCTGCTTGAAGAGCTTTTTCGATATGGATCTGCTGAGCACTTACACGCTTCTCGTATTTCCGCGATTCATCATGCTCCTCATCTCCTTCGTGAACGACTACAGCGTCTATAAAATTTGTCGAGCATATAATCTTCGCTACGACATCAGACTCGTTACTCTCGCGAGTTCGGCTGTAATCTTGACGTTTGGAATTCGCACATTTTCCAACACCATAGAAATGGCTCTCTGCTCCTTCTTGCTGCACCTCATAAGCGAGTGCATGGTGCTCTCGAACACGGTCATTTATCAGAAGGAATTTCTGGAGGAGAAATATGAAAATGCGAGGAACATCGGCGACCGGGTCAAGTACTTCAAGATGCGAATGTCACTGCCCCAGCATTCCTACAGCAAATGCGCAATTTTGTCTTCGATTTGCGTTGTCGGCATCTTCAATCGTCCGACATTCATCTGCTTCGGTCTGCCGCTCATCTTCTTCTGGATGTTGCGCGGGATGGGCACCTCGAAGACGGTGACTTTCTACGACTTTAATCTCCGCATGCTGTTCTTCATAGTGAGCGGCTTGCCCGCATTTGCCCTCATCGTGATCATCGACTCGCTCTATTACGGCTACTTATCGCTGGCGCAAGTCTACATTCTCGACATATCGATTTACAGCTTCCTCGTGACGCCCGTGAATTTCATTCGATACAATATAAATTCCAGCAATACTGCAGCTCACGGCGAGCATCCGCGCTGGCTTCATCTCCTCATCAACATTCCGCTGCTCTACAACATTCTCGGCGTGATTACGGTCGCATCGTTCGGCAGCATGGTCTACAAGTTCTGCAAGAAGGAATTTCAGAACTTGCCGCAATCGCAGTCCTTCATGTTCGTCATGACGAGCGCCATTTTCGCGCCCGTTTTTCTCCTGTCGCTCTTCAACCACCAGGAGCCGAGGTTTATCATTCCGATCACGGCGCCAATCGTGCTGCTCCACTCGCCGAAATTAATTACCGGCATCAATCTCACGGGCTTTTTGCGCGAGTCGAAATGGAGCGCGCTGAGGTATTTGGGTGATTACGTTAATGTGACAATTAGTGGAAGATTTATACTGAAAGTGTGGTACACGATGAACATCATCGCGACGCTCTTCTTCGGCTTCATCCATCAGGCGGGTGTGGTGCAGCTGAACGAATTCATGTCGACTTACACGCAGCAGCTGCAGACTGAGAATTCTCACGTTCACCTCGTCACAAGCAACATCTACATGATCCCCGAGTCGCTGTTTGTTGTGCCGAACTCAAACGTCATTCACACGGACGCCGAGACGGGCATGAAGTACAAAAAGTCGAGGAAATTTTTCACATACGAGTACCAGAGCTTGGACGTTGACTTGATGTTTAAACGAATGAAAATCATTCTCGACGCTGCCGAAATGAAATATCAAACGAAACGCGTCAAGTATGAAGTTCTTATCGCCATTCCGTCCAGCAAAGCATACGAACTGAATCAGCTCTTTTATAAGCACCAAAATCTCATGAGCTACAAACAGTTGCACGCCTTTTACCCGCATCTGTCGACCGAAGCATTTCCCAACGTCTACAGTGTTTACCACCCGTGCGAAATAAATACAGACGTCGACGAGCTGGACGAGACTTGCACTGTCGAGAACTATGATGACCTAACGAGCGGCGAAGTTTCTGTTGCGGGCGTGCTGAGAAAGGTCTCGTCTATTGCACATCAATTCGGATTGATGCTTTACAAAGTCGAAGTGAAGAGGAAGAAGCCGCAAGAGAAG
Protein: 712 (aa)
MNNGRGSPVYGDDYVKSLYASHENEQKVTKPRKFLKRRENFSLFTYFFFIIIRIALVFLPQYGYIHPDEFFQTTEVITGEVFELEATRTWEFNSTMPIRSYAIPFFYLKIPMVFLKFILICLKSFFDMDLLSTYTLLVFPRFIMLLISFVNDYSVYKICRAYNLRYDIRLVTLASSAVILTFGIRTFSNTIEMALCSFLLHLISECMVLSNTVIYQKEFLEEKYENARNIGDRVKYFKMRMSLPQHSYSKCAILSSICVVGIFNRPTFICFGLPLIFFWMLRGMGTSKTVTFYDFNLRMLFFIVSGLPAFALIVIIDSLYYGYLSLAQVYILDISIYSFLVTPVNFIRYNINSSNTAAHGEHPRWLHLLINIPLLYNILGVITVASFGSMVYKFCKKEFQNLPQSQSFMFVMTSAIFAPVFLLSLFNHQEPRFIIPITAPIVLLHSPKLITGINLTGFLRESKWSALRYLGDYVNVTISGRFILKVWYTMNIIATLFFGFIHQAGVVQLNEFMSTYTQQLQTENSHVHLVTSNIYMIPESLFVVPNSNVIHTDAETGMKYKKSRKFFTYEYQSLDVDLMFKRMKIILDAAEMKYQTKRVKYEVLIAIPSSKAYELNQLFYKHQNLMSYKQLHAFYPHLSTEAFPNVYSVYHPCEINTDVDELDETCTVENYDDLTSGEVSVAGVLRKVSSIAHQFGLMLYKVEVKRKKPQEK
| Type | Start | End | Length |
| CDS |
36766 |
37000 |
235 |
| CDS |
37078 |
38978 |
1901 |
| intron |
37001 |
37077 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR20261 |
hypothetical protein AND_20395 [Anopheles darlingi] |
0.0 |
| InterPro |
IPR005599 |
GPI mannosyltransferase |
|
| Gene Ontology(BP) |
GO:0006506 |
GPI anchor biosynthetic process |
|
| Gene Ontology(CC) |
GO:0031227 |
intrinsic to endoplasmic reticulum membrane |
|
| Gene Ontology(MF) |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
| Pfam |
PF03901.12 |
Alg9-like mannosyltransferase family |
3.2e-86 |
| Pfam |
PF11755.3 |
Protein of unknown function (DUF3311) |
0.63 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL000899 |
| C. quinquefasciatus |
CPIJ002788 |
| N. vitripennis |
NV18557-PA |
| T. castaneum |
TC015632 |
| B. mori |
BGIBMGA005760-TA |
| D. melanogaster |
FBgn0035002 |
| A. gambiae |
AGAP010910 |
| D. plexippus |
DPOGS215698PA |
| A. mellifera |
GB15883-PA |
| H. melpomene |
HMEL009650-PA |
| P. vanderplanki |
Pv.14714 |
| M. musculus |
ENSMUSG00000045625 |
| H. sapiens |
ENSP00000413405 |
| P. humanus |
PHUM194380-PA |
| S. invicta |
SI2.2.0_14422 |