MidgeBase gene description page [Pn.10934]
Outline
| Gene ID | Pn.10934 |
| Type | Protein coding gene |
| Scaffold | PnScaf12433 |
| Start | 75056 |
| End | 76825 |
| Direction | - |
Sequence
Transcript: 966 (bp)
ATGGAAATTTTGAAGAAGTTTTTAATCATAATTGTTTTGATAGAGACACTAGAAGTTTATACAATAGCTGCACATCGCTTCGGGTATTCGGCATCGGAGCAGCGAATGTGGAAGAGAAAGCACAAGCATTGTAACGGCAGATATCAGTCACCGATATCAATTCATTCTCGTCGTGCAATTCCATCTGCCATGCCGGCTATTGAATTCATCCATTTTCACAATCCACTTCCTGGTCCACTGACAATTCACAACAATGGACACTCCGTTTCACTTCTAACGCAGAAATTCGAGAACTCGACGAAATTCAAACAGCCATATATTTTTGGTGGCAAGCTGCGTAATGAATACGCTTATTTTGGCCTACACTTTCATTGGGGCGACAGAAATTCGAGGGGTGCGGAGCACGTTTTGAACGATATAAGATATCCGCTCGAATTGCACATGATTCACGTGAATCGAAAGTACACGAGCATCGAGGAAGCTCTCAATTACAAGGATGGCTTGGCAGTTCTCGCATTTTTCTATCAGATTAGAGAAAATTTATTGGATGGCGTTGAAATTGATAACATTGTCAGACATTTCGATGACCTGGACGAAGGAGTCGATAGCGTCACATTGCCTTACACGTTTTCATTGCAATCGTTGATTGGGAACATAAATACGGATCGATTCTACACTTATCGGGGCTCGCTGACGACACCGAAGTGCAATGAGGCTGTCACTTGGATAATTTTTCCCGATACGATTCCAATTTCCTTGCATCAAATGTCGAAGTTCCGCACACTGTCGAACGGCATCGAAGGACTGTTACTTGTTGACAATTATCGGCATCTTCAGCCCATAGGAAATCGAAAAATTTACCTCCGCACAATCACCTCACGTTCGATTGAGCTGGAGAAACTTGTTGAAACCGAGTGGAGTGAAGGCAACAGCGAAGAGGATGAGTCGTCGGAGTGGTACTACACA
Protein: 322 (aa)
MEILKKFLIIIVLIETLEVYTIAAHRFGYSASEQRMWKRKHKHCNGRYQSPISIHSRRAIPSAMPAIEFIHFHNPLPGPLTIHNNGHSVSLLTQKFENSTKFKQPYIFGGKLRNEYAYFGLHFHWGDRNSRGAEHVLNDIRYPLELHMIHVNRKYTSIEEALNYKDGLAVLAFFYQIRENLLDGVEIDNIVRHFDDLDEGVDSVTLPYTFSLQSLIGNINTDRFYTYRGSLTTPKCNEAVTWIIFPDTIPISLHQMSKFRTLSNGIEGLLLVDNYRHLQPIGNRKIYLRTITSRSIELEKLVETEWSEGNSEEDESSEWYYT
| Type | Start | End | Length |
| CDS |
75059 |
75339 |
281 |
| CDS |
75407 |
75577 |
171 |
| CDS |
75812 |
76199 |
388 |
| CDS |
76700 |
76825 |
126 |
| intron |
75340 |
75406 |
67 |
| intron |
75578 |
75811 |
234 |
| intron |
76200 |
76699 |
500 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR28282 |
hypothetical protein AND_03998 [Anopheles darlingi] |
2e-94 |
| InterPro |
IPR023561 |
Carbonic anhydrase, alpha-class |
|
| InterPro |
IPR001148 |
Alpha carbonic anhydrase |
|
| Pfam |
PF00194.16 |
Eukaryotic-type carbonic anhydrase |
1.9e-54 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL004340-PA |
| N. vitripennis |
NV13967-PA |
| A. aegypti |
AAEL008828 |
| A. gambiae |
AGAP003289 |
| M. musculus |
ENSMUSG00000090236 |
| C. quinquefasciatus |
CPIJ002014 |
| P. vanderplanki |
Pv.10542 |
| D. plexippus |
DPOGS209845PA |
| B. mori |
BGIBMGA008072-TA |
| A. mellifera |
GB19956-PA |
| D. melanogaster |
FBgn0039486 |