MidgeBase gene description page [Pn.10788]
Outline
| Gene ID | Pn.10788 |
| Type | Protein coding gene |
| Scaffold | PnScaf12169 |
| Start | 5737 |
| End | 6731 |
| Direction | - |
Sequence
Transcript: 768 (bp)
ATGATGGCCGAGGCGACAGCGAGCGTCAACCGGCGCGAGATCGAGACTTTCGAGAGGTTTGCGAGCGACTGGTGGACGCCCAACGGACCGGCCACGCTCCTCCACAAAATGGTGCCGACCATTCGCATCCCGCTCATCGTGGACGGATTGAGCCAAAGTGGAAGGGTCGAGGCCGAAAATCGGGACAAGCCGGGCGTTTTGGCGGGCTTGAAGTTTCTGGACGTCGGCTCAGGAGTGGGAACGACAACGGAAGTCCTTGCCCGGCTGGGCGCCGACGTGGTTGGCATCGATCCGGCCGAGAAGCTCATCGAAGCAGCCAGCGATCGCGTCAGAAACGGCAGCGAAAATCTCACAATCGCCTACCATTGCGACACGGTCGAGAATTTTTGCAGAGAAAACAGCGCAAAATTCGACGTCGTTACCTTGTTCGATGTGGTCGAGCACGTGGCTGACGTGAGGCTCGTTCTGAAGTCCAGTGTCGAGTGCCTGAAGCCGGGCGGTCAGATTTTCATCATCACGTGGAACAAGACGTTCATGGCGTGGTTTTACGGCATCTTCATACTCGAGTACGTCACTCGGTGCATCCCGCGCGGCGTCCACTCGCTGTCGATGTTTGTCAAGCCCGACACAGTCAAGGAGCTCCTCGAGGAGTTTGGATGCAAGGACGTTGAGGTCAGAGGCATGTGGTACAGTCTGTGGAGGAAAAACTGGAGCTTCAGCTCTTACAAAGGCGTCACCTACACTGTCAGGGCTGTCAAGGGAGGCGAC
Protein: 256 (aa)
MMAEATASVNRREIETFERFASDWWTPNGPATLLHKMVPTIRIPLIVDGLSQSGRVEAENRDKPGVLAGLKFLDVGSGVGTTTEVLARLGADVVGIDPAEKLIEAASDRVRNGSENLTIAYHCDTVENFCRENSAKFDVVTLFDVVEHVADVRLVLKSSVECLKPGGQIFIITWNKTFMAWFYGIFILEYVTRCIPRGVHSLSMFVKPDTVKELLEEFGCKDVEVRGMWYSLWRKNWSFSSYKGVTYTVRAVKGGD
| Type | Start | End | Length |
| CDS |
5740 |
6049 |
310 |
| CDS |
6148 |
6385 |
238 |
| CDS |
6512 |
6731 |
220 |
| intron |
6050 |
6147 |
98 |
| intron |
6386 |
6511 |
126 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314502 |
AGAP010535-PA [Anopheles gambiae str. PEST] gb|EAA09904.4| AGAP010535-PA [Anopheles gambiae str. PEST] |
5e-48 |
| InterPro |
IPR010233 |
Ubiquinone biosynthesis O-methyltransferase |
|
| Gene Ontology(BP) |
GO:0006744 |
ubiquinone biosynthetic process |
|
| Gene Ontology(MF) |
GO:0008425 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
|
| Pfam |
PF08242.7 |
Methyltransferase domain |
2.3e-15 |
| Pfam |
PF01209.13 |
ubiE/COQ5 methyltransferase family |
1.4e-10 |
| Pfam |
PF12847.2 |
Methyltransferase domain |
4.3e-16 |
| Pfam |
PF03848.9 |
Tellurite resistance protein TehB |
0.0025 |
| Pfam |
PF01555.13 |
DNA methylase |
0.097 |
| Pfam |
PF13489.1 |
Methyltransferase domain |
8.2e-23 |
| Pfam |
PF13847.1 |
Methyltransferase domain |
2.5e-15 |
| Pfam |
PF13659.1 |
Methyltransferase domain |
2.1e-07 |
| Pfam |
PF01135.14 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
1e-05 |
| Pfam |
PF02737.13 |
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain |
0.11 |
| Pfam |
PF05175.9 |
Methyltransferase small domain |
0.00043 |
| Pfam |
PF05891.7 |
AdoMet dependent proline di-methyltransferase |
7.8e-08 |
| Pfam |
PF02353.15 |
Mycolic acid cyclopropane synthetase |
0.0004 |
| Pfam |
PF08241.7 |
Methyltransferase domain |
1.4e-16 |
| Pfam |
PF13649.1 |
Methyltransferase domain |
1.5e-08 |
| Pfam |
PF05401.6 |
Nodulation protein S (NodS) |
3.6e-05 |
| Pfam |
PF00398.15 |
Ribosomal RNA adenine dimethylase |
0.00029 |
| Pfam |
PF02390.12 |
Putative methyltransferase |
0.042 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes