MidgeBase gene description page [Pn.10787]
Outline
| Gene ID | Pn.10787 |
| Type | Protein coding gene |
| Scaffold | PnScaf12169 |
| Start | 3904 |
| End | 5188 |
| Direction | - |
Sequence
Transcript: 765 (bp)
ATGGAGGACCTTCGAGCCAGCGTGAACGAGAACGAAATCAAGATGTTCGAGACGTTCGCACTCACCTGGTGGGACCCGAACGGAATGGCGATGCTCCTGCACCGGATGATCCCGAAAATCCGCATCCCGCTCATGCTCGACACCTTCATCGAGGAGGGCATGATCAAGCCCGAGAACCGCGACAAGTCAAACGTCTTCGAGGGCCTGAAGATCCTTGATGTCGGCTCGGGCGTGGGCCTGATGTCGGAGCCGATGGCGCTGTTGGGCGCCGAAGTCGTCGGCATCGACCCGGCCGCGAAGCTCGTGCAGGTGGCGCGCGAGCACCTGGAGAAGACGCACGGCGAGAGCCTCAAGGTCGAGTACCACTGCGACACAGTGGAGAGCTTTTGCCGCGCGAACTGCGGCCGCTTCGACGCCGTGACCTTCTTCGACGTGGCCGAGCACGTGGCGGACGTGCGGTCGGTGCTGCGCGCGAGCGTCGAGTGCCTGAAGCCGGGCGGGCAGATCTTCATCACCACGTGGAACAAGACGTTCATGGGCTGGCTGTACGGCATCGTGATGCTCGAGTACGTGACGGGCATTGTGCCGCGCGGCGCGCACTCCATCTCCATGTTCGTGCGGCCCGAGACGATCGAGCGGCTGCTCGCGGAGTTCGGCTGCGAGAAGACCGACGTGCGCGGGACGTGGTTCAGCCTCTGGACCAAGGACTGGAGCTTCTCCTCCTACAAGGACGTCTTCTATGCCATGAAGGCCTCGAAGCTGAAA
Protein: 255 (aa)
MEDLRASVNENEIKMFETFALTWWDPNGMAMLLHRMIPKIRIPLMLDTFIEEGMIKPENRDKSNVFEGLKILDVGSGVGLMSEPMALLGAEVVGIDPAAKLVQVAREHLEKTHGESLKVEYHCDTVESFCRANCGRFDAVTFFDVAEHVADVRSVLRASVECLKPGGQIFITTWNKTFMGWLYGIVMLEYVTGIVPRGAHSISMFVRPETIERLLAEFGCEKTDVRGTWFSLWTKDWSFSSYKDVFYAMKASKLK
| Type | Start | End | Length |
| CDS |
3907 |
4454 |
548 |
| CDS |
4972 |
5188 |
217 |
| intron |
4455 |
4971 |
517 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002090248 |
GE13000 [Drosophila yakuba] gb|EDW89960.1| GE13000 [Drosophila yakuba] |
1e-47 |
| InterPro |
IPR010233 |
Ubiquinone biosynthesis O-methyltransferase |
|
| Gene Ontology(BP) |
GO:0006744 |
ubiquinone biosynthetic process |
|
| Gene Ontology(MF) |
GO:0008425 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
|
| Pfam |
PF03291.11 |
mRNA capping enzyme |
0.011 |
| Pfam |
PF08242.7 |
Methyltransferase domain |
8e-14 |
| Pfam |
PF01209.13 |
ubiE/COQ5 methyltransferase family |
9.9e-07 |
| Pfam |
PF12847.2 |
Methyltransferase domain |
1.3e-16 |
| Pfam |
PF13489.1 |
Methyltransferase domain |
6.6e-24 |
| Pfam |
PF13847.1 |
Methyltransferase domain |
5.5e-16 |
| Pfam |
PF13659.1 |
Methyltransferase domain |
2.7e-06 |
| Pfam |
PF13578.1 |
Methyltransferase domain |
0.089 |
| Pfam |
PF06325.8 |
Ribosomal protein L11 methyltransferase (PrmA) |
0.0023 |
| Pfam |
PF13679.1 |
Methyltransferase domain |
0.058 |
| Pfam |
PF01135.14 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
2.9e-05 |
| Pfam |
PF00107.21 |
Zinc-binding dehydrogenase |
0.077 |
| Pfam |
PF02527.10 |
rRNA small subunit methyltransferase G |
0.019 |
| Pfam |
PF05175.9 |
Methyltransferase small domain |
9.6e-06 |
| Pfam |
PF02353.15 |
Mycolic acid cyclopropane synthetase |
0.00012 |
| Pfam |
PF05891.7 |
AdoMet dependent proline di-methyltransferase |
0.00033 |
| Pfam |
PF08241.7 |
Methyltransferase domain |
3e-15 |
| Pfam |
PF13649.1 |
Methyltransferase domain |
1.7e-07 |
| Pfam |
PF00398.15 |
Ribosomal RNA adenine dimethylase |
2.9e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.17366 |