MidgeBase gene description page [Pn.10786]
Outline
| Gene ID | Pn.10786 |
| Type | Protein coding gene |
| Scaffold | PnScaf12169 |
| Start | 2673 |
| End | 3392 |
| Direction | + |
Sequence
Transcript: 717 (bp)
ATGGCGAGCGTGGATCCGCGCGAGATCGAGAAGTACACGAAGCGGGCGGCGGTGTGGTGGGACCTGAACGGCCCGCAGATGCTCCTGCACAAGCACACGACCGCCATCCGCATTCCCTTCATCGTGCACGGGCTCGCGTCAACAGGACTCGCGCTGCGCGGCCTCAAAGTCCTCGACGTCGGCTGCGGCGGCGGCATCACGAGCGAGCCGCTCGCGCTGATGGGCGCGGACGTGACGGGCGTCGACCCGGCGCCGGCACTCATCGAGGTCGCGCAGAACCACCAGAAAGTCCACGCCGGCCTCGACATCGCCTACGTCTGCGACTCGATCGAGGCTTTCAGCGACGGCAACGCCGCCCAATTCGACGCCGTCGTGTGCTGCGAGGTGCTCGAGCACGTGACCGACGTGCGGTCGGTGCTGCGCGCCAGCGTCGCCACCATGAAGCCGGGCGCGCACCTCTTCGTCACGACCTTCAACCGGACCGTGTTCTCGTTCGTGTGGGCGATCGTCGTCATGGAGCTGCTGTGCGGTATCATCCCGCGCGGCGCCCACAAGTGGCGCATGTTCGTGCCGCCCGAGGACGTCGCCGACATCCTCGACGAGCTCGGCTGCCGGACGGTGGAGGTGCGCGGCGCCTGGTACAGCATCTTCAAGAGGAAGTGGCGCGAGTCTCGCTACACCGGCGTCTTCTACGGCCTGCATGCCGTCAAGGAGCGC
Protein: 239 (aa)
MASVDPREIEKYTKRAAVWWDLNGPQMLLHKHTTAIRIPFIVHGLASTGLALRGLKVLDVGCGGGITSEPLALMGADVTGVDPAPALIEVAQNHQKVHAGLDIAYVCDSIEAFSDGNAAQFDAVVCCEVLEHVTDVRSVLRASVATMKPGAHLFVTTFNRTVFSFVWAIVVMELLCGIIPRGAHKWRMFVPPEDVADILDELGCRTVEVRGAWYSIFKRKWRESRYTGVFYGLHAVKER
| Type | Start | End | Length |
| CDS |
2673 |
3389 |
717 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003403068 |
PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like [Bombus terrestris] |
6e-50 |
| InterPro |
IPR010233 |
Ubiquinone biosynthesis O-methyltransferase |
|
| Gene Ontology(BP) |
GO:0006744 |
ubiquinone biosynthetic process |
|
| Gene Ontology(MF) |
GO:0008425 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
|
| Pfam |
PF07021.7 |
Methionine biosynthesis protein MetW |
0.054 |
| Pfam |
PF08242.7 |
Methyltransferase domain |
4.2e-15 |
| Pfam |
PF01209.13 |
ubiE/COQ5 methyltransferase family |
4.9e-08 |
| Pfam |
PF08003.6 |
Protein of unknown function (DUF1698) |
0.013 |
| Pfam |
PF12847.2 |
Methyltransferase domain |
3e-15 |
| Pfam |
PF03848.9 |
Tellurite resistance protein TehB |
0.00016 |
| Pfam |
PF13489.1 |
Methyltransferase domain |
5.7e-23 |
| Pfam |
PF13847.1 |
Methyltransferase domain |
3.2e-14 |
| Pfam |
PF13659.1 |
Methyltransferase domain |
7.9e-06 |
| Pfam |
PF06325.8 |
Ribosomal protein L11 methyltransferase (PrmA) |
4e-05 |
| Pfam |
PF01135.14 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
0.12 |
| Pfam |
PF02527.10 |
rRNA small subunit methyltransferase G |
0.085 |
| Pfam |
PF05175.9 |
Methyltransferase small domain |
0.0006 |
| Pfam |
PF02353.15 |
Mycolic acid cyclopropane synthetase |
0.0014 |
| Pfam |
PF08241.7 |
Methyltransferase domain |
2.8e-16 |
| Pfam |
PF13649.1 |
Methyltransferase domain |
2.4e-10 |
| Pfam |
PF05401.6 |
Nodulation protein S (NodS) |
9.5e-09 |
| Pfam |
PF00398.15 |
Ribosomal RNA adenine dimethylase |
0.0054 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.17365 |