MidgeBase gene description page [Pn.10760]
Outline
| Gene ID | Pn.10760 |
| Type | Protein coding gene |
| Scaffold | PnScaf12137 |
| Start | 17774 |
| End | 20144 |
| Direction | + |
Sequence
Transcript: 2253 (bp)
ATGGATAACAACAACCCTGAGATGCATCGATTTCCGCCTCCTCCTATGCTGCCACCGCCTGGAATACCCCCAGCAATTTCAAATAGCTGGATGAATGATGACGACTTTCCTAGATTTGATCAGCAAACTGCATCAAATCCGATTATTCAGCAACAGCAACAACAACCGTCGCCACAACAACAACAACAACATCAACAACAAGCAAGTCCAAACTCAGAAGATCCAGCGGCAAAGAAATTGCCACCGCCTCCACTTATGTCACTCAAGATACATAAACCCGAAAATAATGCTGCAGCACCTGTCGAAAAAAGTGAACTAGTGCTGCCGAAAGCATTAGAAGACGTTTTGGCACTCAGCTCGCAACTGAAAGAAACGTCAATTCAAAGCCAGCCTCAAATTCCCACGAATGATTTTCTGAATGATTTTGACGCTGACGCTAGCGATGACGAGGAGAATAGTGCACAAGCCACTGCAAAGGGAAACAAAAGCAGCAACAAAAATCGCAAGAAGAAAAATCGAAAGAAACAAAATCGTCAAAAGAAACTAGAAGAAGCCCAGAAGCAAAAAGAGGAATCCAACCAGGAAAATGAAAGTTTAGAACAAACGGAAGTGACTGAATCGAGTGAAAAGGAAAAAGCCGATCCAGAAACTGAGAACGTTGATATTGAGTATGTTCCAGAGAAAATCACCATCGCCGATCTCGCTCCAATGTATCGTCAGTTTTATCGGGTCTTTGAAATATTCAAGTTGGAAAATAAACCGAAGGAGGCTCCGATGCCGGTCCAAACAACCGAGGAAGCAAAAGCAGCAAAGAAGGCGGAAAAGAGCGAAAGTGAAGATGACCAGGACGATGCTGACGAAAAGAAGGACGATAAAGATAAAATATCGAAGCGTAAATTGAAAAAGTTGACTCGCCTGAGTGTTGCCGAGCTGAAGCAAATAGTCAATCGTCCCGATGTCGTTGAGATGCACGACGTGACTGCAAAGGATCCGAAGCTTCTCATTCAGCTGAAGGCTCATCGCAACACAGTTCAAGTTCCTCGTCATTGGTGCTTCAAGAGGAAATATTTGCAGGGAAAGCGAGGTATCGAGAAGCCTCCGTTTGACTTGCCTGCATTTATCAAGAAGACCGGCATCATGGAAATGCGAGCATCTCTGCAAGAAAAAGACGAAGCAAAAACACTGAAGGCTAAGATGCGCGAGAAGATCAGGCCGAAAATGGGAAAAATTGATATCGACTATCAGAAGCTGCACGATGCGTTTTTCAAGTGGCAAACCAAGCCGAGAATGACCATTCACGGCGACTTGTATTACGAGGGGAAAGAATTCGAGACTCGCTTGAAAGAGAAGAAGCCGGGCGACTTGAGCGAGGAGCTAAGGACGGCTTTGGGAATGCCGATTGGTCCGGCATGTCACAAAATTCCGCCTCCATGGCTGATTGCTCAGCAACGTTACGGCCCGCCGCCAAGCTATCCAAATTTGAAGATTGCCGGTCTCAATGCTCCAATTCCAGATGGCTGTTGCTTTGGCTATCACGCAGGAGGCTGGGGAAAGCCGCCAGTCGACGAGAATGGCAAGCCACTGTACGGAGATGTTTTCGGGACGAGCAACCTCGATAACGATAGCGGCGTGGGCGATGAGGAGGTCGATAGAACGTTGTGGGGCGAGCTGGAGTCGGAGTCGGAAGAGTCATCGGAGGAGGAGTCAGAGGAAGAGGGCGATGAGGATTTGACGGGAGCGAACGCACAAGACGACTCGGGTCTGGCAACTCCCGCTGGCCTTGAAACTCCTTCCGGCTTGACAAGCGTTCCGGCCGGCATGGAAACTCCAGATTCAATCGAGTTGAGGAAGAAGCGAATCGAAGCGGAAATGGAGGACAACGAGACGCCTGTCCTATACCATGTTCTGCCCGAGAAGAGAACCGAACGCATTGGCGGTTCCATGATGGCTTCGACTCACGTCTACGACGTTGCTGGCGGAGCTGCTCTTGCACAGTCGTCTGCGCGAAGGACGGCTCACGTTGAGCGCGAAGGAATGGTCGAGCTGGCACTGAATCCCGATGAACTCGACTTGGACAATGAGGCGATGGCACAGCGATATGAACAGCAGATGAGAGAACAGCAGAGTCACTTGCAAAAGGAAGATCTATCGGATATGTTGGCCGAGCATGTCGCTCGACAAAAATCCAAACGCAAGCGTCAACAGACGACAACCAATCCCAAACAAAAGGACGACTACAAGAAGTTTAAATTT
Protein: 751 (aa)
MDNNNPEMHRFPPPPMLPPPGIPPAISNSWMNDDDFPRFDQQTASNPIIQQQQQQPSPQQQQQHQQQASPNSEDPAAKKLPPPPLMSLKIHKPENNAAAPVEKSELVLPKALEDVLALSSQLKETSIQSQPQIPTNDFLNDFDADASDDEENSAQATAKGNKSSNKNRKKKNRKKQNRQKKLEEAQKQKEESNQENESLEQTEVTESSEKEKADPETENVDIEYVPEKITIADLAPMYRQFYRVFEIFKLENKPKEAPMPVQTTEEAKAAKKAEKSESEDDQDDADEKKDDKDKISKRKLKKLTRLSVAELKQIVNRPDVVEMHDVTAKDPKLLIQLKAHRNTVQVPRHWCFKRKYLQGKRGIEKPPFDLPAFIKKTGIMEMRASLQEKDEAKTLKAKMREKIRPKMGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGDLSEELRTALGMPIGPACHKIPPPWLIAQQRYGPPPSYPNLKIAGLNAPIPDGCCFGYHAGGWGKPPVDENGKPLYGDVFGTSNLDNDSGVGDEEVDRTLWGELESESEESSEEESEEEGDEDLTGANAQDDSGLATPAGLETPSGLTSVPAGMETPDSIELRKKRIEAEMEDNETPVLYHVLPEKRTERIGGSMMASTHVYDVAGGAALAQSSARRTAHVEREGMVELALNPDELDLDNEAMAQRYEQQMREQQSHLQKEDLSDMLAEHVARQKSKRKRQQTTTNPKQKDDYKKFKF
| Type | Start | End | Length |
| CDS |
17774 |
17794 |
21 |
| CDS |
17910 |
20141 |
2232 |
| intron |
17795 |
17909 |
115 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR25054 |
hypothetical protein AND_09953 [Anopheles darlingi] |
0.0 |
| InterPro |
IPR006568 |
PSP, proline-rich |
|
| InterPro |
IPR007180 |
Domain of unknown function DUF382 |
|
| Gene Ontology(CC) |
GO:0005634 |
nucleus |
|
| Pfam |
PF04046.11 |
PSP |
2.8e-20 |
| Pfam |
PF04037.8 |
Domain of unknown function (DUF382) |
1.9e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000318861 |
| C. quinquefasciatus |
CPIJ010596 |
| M. musculus |
ENSMUSG00000024853 |
| T. castaneum |
TC008829 |
| N. vitripennis |
NV14852-PA |
| H. sapiens |
ENSP00000432655 |
| B. mori |
BGIBMGA004823-TA |
| H. sapiens |
ENSP00000436757 |
| A. gambiae |
AGAP006240 |
| D. melanogaster |
FBgn0031493 |
| H. sapiens |
ENSP00000431520 |
| A. aegypti |
AAEL006725 |
| D. plexippus |
DPOGS214942PA |
| P. vanderplanki |
Pv.09551 |
| N. vitripennis |
NV17700-PA |
| S. invicta |
SI2.2.0_06874 |
| P. humanus |
PHUM253200-PA |
| A. mellifera |
GB12513-PA |
| H. melpomene |
HMEL015593-PA |
| H. sapiens |
ENSP00000431908 |