MidgeBase gene description page [Pn.10735]
Outline
| Gene ID | Pn.10735 |
| Type | Protein coding gene |
| Scaffold | PnScaf12111 |
| Start | 14686 |
| End | 16536 |
| Direction | - |
Sequence
Transcript: 1479 (bp)
ATGAAAACATTAGTAGTACTGTTGGCACTTGCCGCTTTATCGTGTACACTCATTCTTGCGACAGATTTCAAGGGTTTTGACGATAATATTCTATTTTCTCTAAATTGGCCCGGAGACAACTTGAATTTATTGGACGCTGGTGAGAACGATGAAAACATAAAGGTTACCACTCACGCAAACGAAAAGTATCAGTGCCACTTGCCAAAGTTATCGAAGAAAGAGGATGATTTGGAGAAAGCTACACTTGAGACTTCAGTACTCGACTATCTTGAGCCACTTTTTAGAGGCGACGTTTGTTCTTATCGCATTGAATCCTATTGGACTTACGAAATATGTCATGGAAACTACATCAAGCAGTACCACGAGGAACGAGACGGCAAAACAACTAAATTACAAGAGTATTACTTGGGAAAATGGAATAAACAAATGACAGCAGCTTTGCGAACGAAACTGGAGGCCAACAAAGACGAAAAATTGAAATTTTTAAAAATTGATGGAATCAATCTGGCATATTTTGAAGTGGAAATGGTCGATGGCACTATCTGTGATTTGAATAATGAACCGCGAGTTACAAGAGTTCTTTATGTGTGTTATGCTCATGGAAAAAATGAAATTTATTCACTCAAAGAAACATCAACATGCAACTACGAGATAATAGTTCTCACACCAACCTTATGCCTGCATCCCAAGTACAAAATTCAAGAGACGAAAGAAAATCCCGTAAATTGTGTTCCGCTTGATAATGCGCCGAAGAAACCAAAAAGCCTGCTCGCCCTGGAGGTCGAGAGCATGAAGCTTAGATACCAGAAATTAATGGATGTTAATAAGGGCCTTAAAGAAGCTATAGCAGTTTTTAAGGTAGACTCAAAGGATGGCAAGCTCACCATGGAACTCGTAGAAGATGTAAACTCTAAACAAATTGAAGACTTGCTTGGAAAAATTGAAGGAGGAAGTAGCACTGGCTCCAGCGCCGAAACTTCAAAACCATTTTCAACGTTCAGCACGACTCCGGATGACACCTCCATAGTCGAGAGCTTTCTCGCAGGTAAAACGTGTCTGACGGGTGGAACCGGCTGGTGGAAGTATGAGTTCTGCTATGGCAAATATGTGAGGCAATATCACAACGACAAGTTTGGAGGAATGTCGACCATCATGCTTGGAACTTTCGATGAGGCGAAACACAAAGAATATCTCGATGCTCATCCGGACAAGAAACCGAAGGCGAAGAGCAAGAAGAGACAAATTACTCACTTTTACTCGGAGGGAAGTATGTGCGACAAAACGCAGAAAAACCGACAGGTTGAAGTAATTTTAAAATGTTTGGAAAATCCATCTACGCCATCGGCCGTCAGTCTTTATTTGGTGGAACCAAAAGTCTGCACATATGTTCTTGGTGTTGAAAGCGCACTCATCTGCAATATCATTGATAGGGTAGATGAGTATGGCCTCGTATCAATGAGCAGTGAAGCATTAGAGGAC
Protein: 493 (aa)
MKTLVVLLALAALSCTLILATDFKGFDDNILFSLNWPGDNLNLLDAGENDENIKVTTHANEKYQCHLPKLSKKEDDLEKATLETSVLDYLEPLFRGDVCSYRIESYWTYEICHGNYIKQYHEERDGKTTKLQEYYLGKWNKQMTAALRTKLEANKDEKLKFLKIDGINLAYFEVEMVDGTICDLNNEPRVTRVLYVCYAHGKNEIYSLKETSTCNYEIIVLTPTLCLHPKYKIQETKENPVNCVPLDNAPKKPKSLLALEVESMKLRYQKLMDVNKGLKEAIAVFKVDSKDGKLTMELVEDVNSKQIEDLLGKIEGGSSTGSSAETSKPFSTFSTTPDDTSIVESFLAGKTCLTGGTGWWKYEFCYGKYVRQYHNDKFGGMSTIMLGTFDEAKHKEYLDAHPDKKPKAKSKKRQITHFYSEGSMCDKTQKNRQVEVILKCLENPSTPSAVSLYLVEPKVCTYVLGVESALICNIIDRVDEYGLVSMSSEALED
| Type | Start | End | Length |
| CDS |
14689 |
15297 |
609 |
| CDS |
15439 |
15492 |
54 |
| CDS |
15661 |
16344 |
684 |
| CDS |
16405 |
16536 |
132 |
| intron |
15298 |
15438 |
141 |
| intron |
15493 |
15660 |
168 |
| intron |
16345 |
16404 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001652998 |
xtp3-transactivated protein b [Aedes aegypti] gb|EAT40367.1| xtp3-transactivated protein b [Aedes aegypti] |
1e-130 |
| InterPro |
IPR009011 |
Mannose-6-phosphate receptor binding domain |
|
| InterPro |
IPR012913 |
Glucosidase II beta subunit-like |
|
| Pfam |
PF07915.8 |
Glucosidase II beta subunit-like protein |
3.3e-34 |
| Pfam |
PF13015.1 |
Glucosidase II beta subunit-like protein |
2.5e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_00602 |
| N. vitripennis |
NV13426-PA |
| D. melanogaster |
FBgn0032398 |
| A. aegypti |
AAEL007891 |
| H. sapiens |
ENSP00000185150 |
| P. vanderplanki |
Pv.00230 |
| M. musculus |
ENSMUSG00000020311 |
| H. sapiens |
ENSP00000367485 |
| P. humanus |
PHUM346130-PA |
| A. gambiae |
AGAP009546 |
| D. plexippus |
DPOGS207666PA |
| T. castaneum |
TC000223 |
| H. melpomene |
HMEL009305-PA |
| A. mellifera |
GB13275-PA |
| C. quinquefasciatus |
CPIJ802114 |
| B. mori |
BGIBMGA010527-TA |
| H. sapiens |
ENSP00000385629 |