MidgeBase gene description page [Pn.10726]
Outline
| Gene ID | Pn.10726 |
| Type | Protein coding gene |
| Scaffold | PnScaf12109 |
| Start | 28367 |
| End | 31330 |
| Direction | + |
Sequence
Transcript: 948 (bp)
ATGGATATCATAAGCATTTCGCCATGCACCAAGCGAATACTTGAGACAGGAAAAGAAAAACCCGATTGCCACATATCAGGCGTCTCAAGAAGTGAACTTCAGAATTTTCTAACGCCCGTGAAAACCGATCAAGAAATTATGGAGAGTTCTATGGCGGAGGATCGTGTGACGGAGGAGGAAGAGGTCGAAAATTCAGAAAAGTCGCAGCGCTGGGGGAAAAATCACAAGGGAGCAAAAATTCTAGCAAACTTTTACAGTCGAGGAAAGCGAATACAGGAGTACTTTTGCGTCTACACCTGCATCACTCTAATGCTTATCAATTTTTTCTTCGTCCTAAAATATTTACGGCTGGAACATTTCAATCACGTCGTGCTGTCGGGAATTTGTGGGATTTTAACAGCTGACTTTGGCTCGGGCTTTGTACATTGGGCGGCTGATACTTGGGGTTCCGTTGAGCTGCCGGTAATCGGAAAAAACTTTCTTCGACCATTCCGTGAACACCACATTGACCCGACGAGCATTACACGTCACGATTGGATTGAAACGAACGGGGACAACTTTATGATAAGCATACCGATTTTGTCGAGATTATTGTGGATTTTTCACACGACTCCAGTCGCCGAGCTCGATGCCGTTTTTCCGTACTGCGCATTTCTGTTCCTATGCTCAATTTTCGTAGCTATCACAAATCAAATTCACAAATGGTCACACACGTACTTTGATCTGCCAATATGGGTGCAAATTTTACAAAATTATCACATCATACTGCCTCGAAAGCACCATCGCATTCATCACGTCGCGCCTCATGAAACGTATTTCTGCATCACCACAGGATGGCTGAACTATCCGCTCGAGAAAATAAGATTTTGGTCAACGCTTGAATCGGTTGTGACACTGCTGACTGGCTGTAAACCACGAGAAGATGATCTCAAGTGGGCAAAAACATCT
Protein: 316 (aa)
MDIISISPCTKRILETGKEKPDCHISGVSRSELQNFLTPVKTDQEIMESSMAEDRVTEEEEVENSEKSQRWGKNHKGAKILANFYSRGKRIQEYFCVYTCITLMLINFFFVLKYLRLEHFNHVVLSGICGILTADFGSGFVHWAADTWGSVELPVIGKNFLRPFREHHIDPTSITRHDWIETNGDNFMISIPILSRLLWIFHTTPVAELDAVFPYCAFLFLCSIFVAITNQIHKWSHTYFDLPIWVQILQNYHIILPRKHHRIHHVAPHETYFCITTGWLNYPLEKIRFWSTLESVVTLLTGCKPREDDLKWAKTS
| Type | Start | End | Length |
| CDS |
28367 |
28480 |
114 |
| CDS |
28816 |
28963 |
148 |
| CDS |
30579 |
31179 |
601 |
| CDS |
31243 |
31327 |
85 |
| intron |
28481 |
28815 |
335 |
| intron |
28964 |
30578 |
1615 |
| intron |
31180 |
31242 |
63 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_318759 |
AGAP009703-PA [Anopheles gambiae str. PEST] gb|EAA14566.3| AGAP009703-PA [Anopheles gambiae str. PEST] |
1e-109 |
| InterPro |
IPR019547 |
Kua-ubiquitin conjugating enzyme hybrid, localisation |
|
| Pfam |
PF10520.4 |
Kua-ubiquitin conjugating enzyme hybrid localisation domain |
5.8e-77 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.03443 |
| B. mori |
BGIBMGA006224-TA |
| M. musculus |
ENSMUSG00000090213 |
| H. sapiens |
ENSP00000360715 |
| N. vitripennis |
NV11394-PA |
| H. sapiens |
ENSP00000360713 |
| H. sapiens |
ENSP00000360719 |
| H. melpomene |
HMEL007325-PA |
| C. quinquefasciatus |
CPIJ005919 |
| S. invicta |
SI2.2.0_07547 |
| A. mellifera |
GB10104-PA |
| D. plexippus |
DPOGS214200PA |
| A. gambiae |
AGAP009703 |
| A. aegypti |
AAEL001208 |
| T. castaneum |
TC013062 |
| D. melanogaster |
FBgn0032850 |