MidgeBase gene description page [Pn.10630]
Outline
| Gene ID | Pn.10630 |
| Type | Protein coding gene |
| Scaffold | PnScaf11938 |
| Start | 29174 |
| End | 31014 |
| Direction | + |
Sequence
Transcript: 1368 (bp)
ATGATCATTGATCACCTGCCGGGCGGGAGATTTTACAATGTTGGCCTAAATGAGATGCATAGATTGCTACGTCATGAATATGGAAACATCATAGTCATGCCAGGCATGCTGGGAAAACCGGAAATAGTTTTCTCCTATAGCGACGTTGACAATCAAACGATTCTGTTGAATGAAGGCACTTGGCCGAACAGATACTCGTTCGAGATACTTAAATACTTCAGAGAGAAACTGCGGCCGGACGTGTACGGTGGAGAATATGGCAGCGTAGCATCGGAAAATGGTGAAAAGTGGTACAAAATGCGAACGCTGATAAACCAAGCGATGTTACCGCCGAAGAATGTCCAGGAATACGTTCGACTAATGGACGAAATTTCACGAGACTTTGAGAAATTTCTGCAGGCGCGAAACAACGAAATTTCAGGAAATGACGTTAACTACTGGAGTTTGGAAAGCATCGCCTACATAACCCTCAATAAGCGACTGGGACTTTTTGAGGAAGAAATTCGCGATGAGAGAACTCGGGAACTGATCCAATTAGTGCGAAGGTTCTTCATACTGACAGTTAGCTTTGAACTGCAACCGTCCATATGGAAATATTATCACACTAAGGCATTCAAGGAATATATGGACGTAAACAACAGGCTCATCAATATAAACATGAGCTTTGTCGAAGAATCTTTGGCCGCTATGAAAAGCTCATCTAGTGAAAGTACGCGAAAGGGAGGAATTTTGCACAAGTTAATGGAGAAAGATAAGAGAGTAGCTGTCATCATGGCTATTGACGCGCTACTTGCAGGAATCGACACGACGGCCTCCGCTTCGATCGGTATTCTCTACTGTCTCGCAAAAAATCCCGAGAAGCAAGAAAAATTGCGCAAAGAAATTCTTGAGCTTTTTCCAAACAAAAGTGAACCGATTGACGAAAAGAAAATGGCGACCATGCCATACTTAAGAAGTTGCATCAAGGAAGGTCTTCGACTGTACCCACCAGTTTCAGGCTCATCGAGAAGGACACAAAAAGATCTTGTGCTTTCAGGATATCACATCCCGATCGGCACGAATGTTGTCGTGTGGCCGCAACTTTTCTACCGCGATGAAAAATGCTTTCCCAACAGCAACGAGTACATTCCCGAAAGATGGATGAAGGACGAATGTCCGCACTTGCAGTCAAATAAATTTCACTTCCTACCGTTCGGCCATGGTGTAAGGGCGTGTGTTGGAAAGAGGATCGCAAACATGGAGATGGAAGTGCTGCTCATAAATCTCTTGAGAAGTTTCAGAATTGAGTGGCACCAAGACGATCTGAAGGTGAACAGTGTTCTTGTGAACATTCCGGTCGGCGATATTCGATTCAAACTTGTGAAAATT
Protein: 456 (aa)
MIIDHLPGGRFYNVGLNEMHRLLRHEYGNIIVMPGMLGKPEIVFSYSDVDNQTILLNEGTWPNRYSFEILKYFREKLRPDVYGGEYGSVASENGEKWYKMRTLINQAMLPPKNVQEYVRLMDEISRDFEKFLQARNNEISGNDVNYWSLESIAYITLNKRLGLFEEEIRDERTRELIQLVRRFFILTVSFELQPSIWKYYHTKAFKEYMDVNNRLININMSFVEESLAAMKSSSSESTRKGGILHKLMEKDKRVAVIMAIDALLAGIDTTASASIGILYCLAKNPEKQEKLRKEILELFPNKSEPIDEKKMATMPYLRSCIKEGLRLYPPVSGSSRRTQKDLVLSGYHIPIGTNVVVWPQLFYRDEKCFPNSNEYIPERWMKDECPHLQSNKFHFLPFGHGVRACVGKRIANMEMEVLLINLLRSFRIEWHQDDLKVNSVLVNIPVGDIRFKLVKI
| Type | Start | End | Length |
| CDS |
29174 |
29235 |
62 |
| CDS |
29294 |
29506 |
213 |
| CDS |
29688 |
29946 |
259 |
| CDS |
30001 |
30116 |
116 |
| CDS |
30180 |
30336 |
157 |
| CDS |
30451 |
31011 |
561 |
| intron |
29236 |
29293 |
58 |
| intron |
29507 |
29687 |
181 |
| intron |
29947 |
30000 |
54 |
| intron |
30117 |
30179 |
63 |
| intron |
30337 |
30450 |
114 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001855599 |
cytochrome P450 [Culex quinquefasciatus] gb|EDS34543.1| cytochrome P450 [Culex quinquefasciatus] |
1e-117 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002403 |
Cytochrome P450, E-class, group IV |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Gene Ontology(MF) |
GO:0004497 |
monooxygenase activity |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.8e-75 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.16640 |