MidgeBase gene description page [Pn.10574]
Outline
| Gene ID | Pn.10574 |
| Type | Protein coding gene |
| Scaffold | PnScaf11865 |
| Start | 73717 |
| End | 74559 |
| Direction | + |
Sequence
Transcript: 780 (bp)
ATGTTGATAAGAAATCTCATCGGAAGTTCCCTAAAATCTATCAAATTGCTCTCTACAACCGCCTCAAATCATACCAAAATGTCTTTGGAATTAGCGAAAAAAATTGCAGCATGCAAAGCAGTCGAAGATCACGTCAGCGACAATCTTGTCGTCGGCATCGGAAGTGGCAGCACCATTGTTTACGCAGTTCAGAAAATAGCCGAACGAGTGCAGACTGAAGGCCTCAATCTCATTTGTATACCAACGAGTTTTCAGGCCAAACACCTCATTCTCGACAACGGCCTTACGCTCGGAGAGCTCGACAGAAATCCATCGATTGATGTCGCCATCGACGGCGCTGATGAGTGCGATGTCGAGCTGAATTGCATCAAGGGAGGCGGCGGATGCCTTTTGCAAGAGAAGATTGTGGCGTCGTGCGCCAAGAGCCTGATTATCGTCGCCGATCACACCAAAAATTCCGAATATCTCACGGAGAGATACAAAAAGATTCCGATCGAAGTCGCTCCAATCGCCTATGTGCCCATCAAAACTCGGATTGAGTCGCTTTTTGGCGGCGAGCTGAAGCTGAGGATGGGAGTGGCGAAGGCAGGTCCCTGCGTGACCGACAACGGAAACTTCATTCTCGATTGGTTCCTGGACGGTTCGCCATCGACCGATTTCGACGGAATAAATCGAGAGATCCTGATGATTCCGGGCGTGATCGACACCGGACTTTTTATCGGAATGGCGAAAAAGGCATATTTCGGCATGCCCGACGGCTCTGTTATAGAAAAAGAAATT
Protein: 260 (aa)
MLIRNLIGSSLKSIKLLSTTASNHTKMSLELAKKIAACKAVEDHVSDNLVVGIGSGSTIVYAVQKIAERVQTEGLNLICIPTSFQAKHLILDNGLTLGELDRNPSIDVAIDGADECDVELNCIKGGGGCLLQEKIVASCAKSLIIVADHTKNSEYLTERYKKIPIEVAPIAYVPIKTRIESLFGGELKLRMGVAKAGPCVTDNGNFILDWFLDGSPSTDFDGINREILMIPGVIDTGLFIGMAKKAYFGMPDGSVIEKEI
| Type | Start | End | Length |
| CDS |
73717 |
74112 |
396 |
| CDS |
74173 |
74556 |
384 |
| intron |
74113 |
74172 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_554756 |
AGAP011457-PA [Anopheles gambiae str. PEST] gb|EAL39480.3| AGAP011457-PA [Anopheles gambiae str. PEST] |
2e-90 |
| InterPro |
IPR004788 |
Ribose 5-phosphate isomerase, type A |
|
| Gene Ontology(BP) |
GO:0009052 |
pentose-phosphate shunt, non-oxidative branch |
|
| Gene Ontology(MF) |
GO:0004751 |
ribose-5-phosphate isomerase activity |
|
| Pfam |
PF06026.9 |
Ribose 5-phosphate isomerase A (phosphoriboisomerase A) |
6.9e-56 |
| Pfam |
PF00455.17 |
DeoR C terminal sensor domain |
0.00019 |
| Pfam |
PF04198.8 |
Putative sugar-binding domain |
0.0077 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL011627 |
| P. humanus |
PHUM353470-PA |
| B. mori |
BGIBMGA000936-TA |
| H. sapiens |
ENSP00000283646 |
| H. melpomene |
HMEL010098-PA |
| N. vitripennis |
NV10476-PA |
| P. vanderplanki |
Pv.06493 |
| C. quinquefasciatus |
CPIJ004258 |
| T. castaneum |
TC007198 |
| S. invicta |
SI2.2.0_09771 |
| A. gambiae |
AGAP011457 |
| D. plexippus |
DPOGS216003PA |
| D. melanogaster |
FBgn0050410 |
| M. musculus |
ENSMUSG00000053604 |
| A. mellifera |
GB13216-PA |