MidgeBase gene description page [Pn.10572]
Outline
| Gene ID | Pn.10572 |
| Type | Protein coding gene |
| Scaffold | PnScaf11865 |
| Start | 67615 |
| End | 68742 |
| Direction | - |
Sequence
Transcript: 927 (bp)
ATGACGGCGCCGCTGCTGCGCTTGAGAAATGGCTTGGCGATGATTCCATCAATCGGCATGGGAACGGGAAAACTGAAGGGCGAGCAAGGTGTTGCCGCAATAAAGGAGGCCATCGACGCCGGTTACCGGCTCTTCGACACGGCCTTCCTTTACGGAAACGAGGAGACGGTGGGCCGAGCTCTGAAAGAGAAAATCAGCGAGGGCGCCGTGACGCGTAGCGAGCTCTTTATCGTGAGCAAGTTGTGGGGCATTCATCACGGCCAAGTGGAGCGCGCCTGTCGCGAGTCGTGCGCGCGATTTAGCGTCGACTACTTCGATCTCTATCTATTCCACTTTCCCGTGTCGTTTCGCTACCGGAGCGACGAGGAGCGGTGGCCATCGCCCGAAGACTGCCTCGATAACGACTACATGAACGTGTGGTGGGAAATGGAGAAGCTCGTCGAGATGGAATTAGCGAGAAATATTGGCGTGTCGAACTTTAGTGCGCAACAAATTCAGAGGGTCTTCGATGGTGCGAAACACACAAAGCCCGCCTGCAACGAGATGGAGTTTCACCCGGCGTACTCGTGTGATGAATTGTTAAAGTTGTGCGACAAACTCGACATTCGGTCGCTCGCCTACTGTCCCCTCGGACGACCGAAGGCAGAGCGCTCGGAGCCGGCGTTTTTGTATGATGGAAAAGTTAAGGAAATCGCAGAGAAACACCATAAATCACCGGCACAAATTGCTCTGCGCTACGCCATTCAATGCGGTCTCATTCCGATTCCAAAGTCTGCGACAAAGAGTCGCATTCGCGAGAACATAAATGTCTTTGATTTTCAATTGAGCGACGACGAGATGGCGTACTTGGGTGCCTTCAACAATGTCGACAATCAGATTTGCAAATTCCACTTCGCCGAGGGGAGCGTTCATTATCCCTTCCGAAAG
Protein: 309 (aa)
MTAPLLRLRNGLAMIPSIGMGTGKLKGEQGVAAIKEAIDAGYRLFDTAFLYGNEETVGRALKEKISEGAVTRSELFIVSKLWGIHHGQVERACRESCARFSVDYFDLYLFHFPVSFRYRSDEERWPSPEDCLDNDYMNVWWEMEKLVEMELARNIGVSNFSAQQIQRVFDGAKHTKPACNEMEFHPAYSCDELLKLCDKLDIRSLAYCPLGRPKAERSEPAFLYDGKVKEIAEKHHKSPAQIALRYAIQCGLIPIPKSATKSRIRENINVFDFQLSDDEMAYLGAFNNVDNQICKFHFAEGSVHYPFRK
| Type | Start | End | Length |
| CDS |
67618 |
68472 |
855 |
| CDS |
68671 |
68742 |
72 |
| intron |
68473 |
68670 |
198 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002048176 |
GJ13816 [Drosophila virilis] gb|EDW70518.1| GJ13816 [Drosophila virilis] |
8e-73 |
| InterPro |
IPR001395 |
Aldo/keto reductase |
|
| InterPro |
IPR018170 |
Aldo/keto reductase, conserved site |
|
| InterPro |
IPR020471 |
Aldo/keto reductase subgroup |
|
| InterPro |
IPR023210 |
NADP-dependent oxidoreductase domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00248.16 |
Aldo/keto reductase family |
7e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.15742 |