MidgeBase gene description page [Pn.10524]
Outline
| Gene ID | Pn.10524 |
| Type | Protein coding gene |
| Scaffold | PnScaf11798 |
| Start | 8925 |
| End | 9575 |
| Direction | - |
Sequence
Transcript: 576 (bp)
ATGAATTTGTTTAGAAATTACATTTTACACGATCGCGTGTGTGGTTTCTGGACCTGGCTGTTCGTGCTATCGAAACTGCCCGAACTAGGAGATACGATTTTCATCGTTCTTCGAAAACAACCACTGATTTTCTTGCATTGGTATCATCACATTACTGTCCTGATGTACTCGTGGTTCTCTTACACGGAATACACAGCTTCCGCGAGGTGGTTTGTCGTCATGAATTACTGTGTTCATTCACTGATGTACAGCTATTATGCATTACGAGCTATGAAGTTCCATCCACCGAGATTTATTTCAATGCTCATCACGGGTCTCCAACTCACACAAATGATCATCGGATGCGCCATTAATGTCTGGGCTTATGATTATCTTCAAACGGCCGGCCACACTTCGTGTAATATCTCGTCGACCAATATTAAACTTTCGATTGCAATGTACGCCAGTTATTTCATCCTGTTTGCACGCTTCTTCCATCTCACATACTTGTCGGAGAACGCTCGCAAAGGCAAGCGACCAACTTCGACTACTGCATCACAACAGCCCAGACAATTGGATAACAAAATCAAGGCTCAA
Protein: 192 (aa)
MNLFRNYILHDRVCGFWTWLFVLSKLPELGDTIFIVLRKQPLIFLHWYHHITVLMYSWFSYTEYTASARWFVVMNYCVHSLMYSYYALRAMKFHPPRFISMLITGLQLTQMIIGCAINVWAYDYLQTAGHTSCNISSTNIKLSIAMYASYFILFARFFHLTYLSENARKGKRPTSTTASQQPRQLDNKIKAQ
| Type | Start | End | Length |
| CDS |
8928 |
9486 |
559 |
| CDS |
9559 |
9575 |
17 |
| intron |
9487 |
9558 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR26064 |
hypothetical protein AND_08105 [Anopheles darlingi] |
9e-83 |
| InterPro |
IPR002076 |
GNS1/SUR4 membrane protein |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01151.13 |
GNS1/SUR4 family |
1.8e-50 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA012702-TA |
| S. invicta |
SI2.2.0_01830 |
| H. melpomene |
HMEL002981-PA |
| H. sapiens |
ENSP00000304736 |
| H. sapiens |
ENSP00000426086 |
| A. gambiae |
AGAP006520 |
| A. aegypti |
AAEL013128 |
| T. castaneum |
TC013861 |
| C. quinquefasciatus |
CPIJ003007 |
| D. melanogaster |
FBgn0260960 |
| P. vanderplanki |
Pv.17266 |
| P. humanus |
PHUM601890-PA |
| D. plexippus |
DPOGS210062PA |
| H. sapiens |
ENSP00000378105 |
| A. mellifera |
GB19070-PA |
| H. sapiens |
ENSP00000424023 |
| M. musculus |
ENSMUSG00000041220 |
| H. melpomene |
HMEL002980-PA |