MidgeBase gene description page [Pn.10500]
Outline
| Gene ID | Pn.10500 |
| Type | Protein coding gene |
| Scaffold | PnScaf11764 |
| Start | 29742 |
| End | 35321 |
| Direction | + |
Sequence
Transcript: 339 (bp)
ATGTATGTGGATTTAAGTAACGGACAATTGACACCCAACAACAACACCCCTCTCCTCACTCAAGCGCTCTCAGTTATGAACAATTATCAGGCAGCGGCAGCGCAGGGCTACGGACCGCCGACATCACCGCACGCGACCAACACGCGAACCGGATTCCCGGCCGCCAACTCGCCCGGTCCCACCATAGACATGTACAGTTCAAATGGCGCCGACAGCGTGAGCTACGTGCAAGCGACCAGCCCTCAGCCGTCGGGCTTCCCCGCAATCGCCGTCAGCCGTGCGCCACTCAACTACAGTCCTGGACCATTAATACCAGCCGCATTCACAAATGGCTACCAT
Protein: 113 (aa)
MYVDLSNGQLTPNNNTPLLTQALSVMNNYQAAAAQGYGPPTSPHATNTRTGFPAANSPGPTIDMYSSNGADSVSYVQATSPQPSGFPAIAVSRAPLNYSPGPLIPAAFTNGYH
| Type | Start | End | Length |
| CDS |
29742 |
29748 |
7 |
| CDS |
34445 |
34510 |
66 |
| CDS |
34972 |
35198 |
227 |
| CDS |
35280 |
35318 |
39 |
| intron |
29749 |
34444 |
4696 |
| intron |
34511 |
34971 |
461 |
| intron |
35199 |
35279 |
81 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001688945 |
AGAP006656-PB [Anopheles gambiae str. PEST] gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST] |
2e-45 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04931 |
| Pn.10498 |
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC004519 |
| N. vitripennis |
NV11198-PA |
| D. melanogaster |
FBgn0260943 |
| T. castaneum |
TC016295 |
| A. aegypti |
AAEL000729 |
| H. sapiens |
ENSP00000284073 |
| H. sapiens |
ENSP00000462264 |
| C. quinquefasciatus |
CPIJ006948 |
| A. mellifera |
GB16625-PA |
| B. mori |
BGIBMGA009577-TA |
| A. mellifera |
GB18853-PA |
| S. invicta |
SI2.2.0_80273 |
| N. vitripennis |
NV10828-PA |
| N. vitripennis |
NV11199-PA |
| A. aegypti |
AAEL006057 |
| H. sapiens |
ENSP00000313616 |
| D. plexippus |
DPOGS211059PA |
| A. gambiae |
AGAP006656 |
| D. plexippus |
DPOGS213039PA |
| H. sapiens |
ENSP00000257552 |
| H. sapiens |
ENSP00000414671 |
| P. vanderplanki |
Pv.02890 |
| P. humanus |
PHUM361200-PA |
| H. melpomene |
HMEL004432-PA |
| P. humanus |
PHUM013780-PA |
| H. melpomene |
HMEL005867-PA |
| P. vanderplanki |
Pv.02542 |
| A. gambiae |
AGAP001993 |
| D. melanogaster |
FBgn0011666 |
| C. quinquefasciatus |
CPIJ003052 |
| M. musculus |
ENSMUSG00000054256 |
| B. mori |
BGIBMGA006950-TA |