MidgeBase gene description page [Pn.10304]
Outline
| Gene ID | Pn.10304 |
| Type | Protein coding gene |
| Scaffold | PnScaf11230 |
| Start | 26500 |
| End | 27856 |
| Direction | + |
Sequence
Transcript: 1068 (bp)
ATGAATTTAAGCAGATTTTCGGCCACCATCTGTTCGAGAACTCTTCGGCCAAATCAAAACAAAAATTACGGTATTTATGCACTGTCAACAATAAGAAGAAGCTATCATAATGAGAATGCAAACAGTGCCAATTATCAAAGTAGTGCGAGAAATAAGTACATTGCTGGAATCGGTGCGCTACTTTTAGGATCTGGCCTCAGCTACTATTACTTCGCCCACGACAGAATTGATATTAAAGAGGCTTTGTGTGTGGAGCCACACCACGAAAGAGTGAGACTCGACTTGCCTACATATTCGGCCGAAGATGTCGCAAAGCACGCCACTCGACAAAACGGTATTTGGGTGACGTTCGGCATCGGCGTCTACGATATTACGAACTTTGTGCCCGAGCACCCGGGCTCGAAGAGGAACATCATGCTTGGAGCTGGTGCAGCGATCGATCCCTTTTGGCATTTGTACCAGTTTCACAAGCAAGAAAAAATTTTAGCGATGCTGGAAAAATTCAGGATCGGCAATCTGAGACCCGAGGACAGAACATCAGTCGACGATCAAGGAAATCCTTACGCAAATGAACCCGAGAGAAGTTCCAATTTAATCCCAAGGTCAGAGACTCCTTACAATGCCGAACCCACGCTATCGAAGCTCGTTGAAAATTTTATTACACCTGTGGAATACTTCTACGTACGAAATCATTTGCCGGTGCCGACAATTGATCCTGACGACTATGAGCTGGAAGTGGAAATTGAATCGTCGGGCGCTGTAAAAACGTTTTCATTGAAGGACTTGAAGAGAAAATTTGAGAAAACGGGGGTCGTTGCGGTTGTCATGTGCGGAGGAAACAGAAGAATGGAAATGAATGCAGTTAAGGAAGTTCGCGGATTACCGTGGAGCGGTGGTGCTTGTGGAAATGCTGCGTGGGAAGGCGTTCGTTTGTGCGATCTCCTCAGTGCAATGGGTGTGAAGTCAGACGAAAAAAATCACGTCATTCTCGAAGGATACGACAGAGATCCGACGTACACTCCTTACGTGAGTTTTCGCTTTAAAAATTACTTTTTACCACGTTTTTCT
Protein: 356 (aa)
MNLSRFSATICSRTLRPNQNKNYGIYALSTIRRSYHNENANSANYQSSARNKYIAGIGALLLGSGLSYYYFAHDRIDIKEALCVEPHHERVRLDLPTYSAEDVAKHATRQNGIWVTFGIGVYDITNFVPEHPGSKRNIMLGAGAAIDPFWHLYQFHKQEKILAMLEKFRIGNLRPEDRTSVDDQGNPYANEPERSSNLIPRSETPYNAEPTLSKLVENFITPVEYFYVRNHLPVPTIDPDDYELEVEIESSGAVKTFSLKDLKRKFEKTGVVAVVMCGGNRRMEMNAVKEVRGLPWSGGACGNAAWEGVRLCDLLSAMGVKSDEKNHVILEGYDRDPTYTPYVSFRFKNYFLPRFS
| Type | Start | End | Length |
| CDS |
26500 |
26537 |
38 |
| CDS |
26597 |
26778 |
182 |
| CDS |
26933 |
27394 |
462 |
| CDS |
27468 |
27853 |
386 |
| intron |
26538 |
26596 |
59 |
| intron |
26779 |
26932 |
154 |
| intron |
27395 |
27467 |
73 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846041 |
sulfite reductase [Culex quinquefasciatus] gb|EDS42396.1| sulfite reductase [Culex quinquefasciatus] |
9e-87 |
| InterPro |
IPR001199 |
Cytochrome b5 |
|
| InterPro |
IPR008335 |
Eukaryotic molybdopterin oxidoreductase |
|
| InterPro |
IPR000572 |
Oxidoreductase, molybdopterin-binding domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0046872 |
metal ion binding |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00174.14 |
Oxidoreductase molybdopterin binding domain |
8.9e-22 |
| Pfam |
PF00173.23 |
Cytochrome b5-like Heme/Steroid binding domain |
1.6e-11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV17244-PA |
| S. invicta |
SI2.2.0_10299 |
| H. sapiens |
ENSP00000348440 |
| H. sapiens |
ENSP00000450264 |
| H. sapiens |
ENSP00000266971 |
| D. melanogaster |
FBgn0030966 |
| P. vanderplanki |
Pv.05110 |
| B. mori |
BGIBMGA005750-TA |
| D. plexippus |
DPOGS202961PA |
| A. aegypti |
AAEL014110 |
| M. musculus |
ENSMUSG00000049858 |
| A. aegypti |
AAEL014252 |
| P. humanus |
PHUM238870-PA |
| H. sapiens |
ENSP00000377668 |
| T. castaneum |
TC000220 |
| A. mellifera |
GB19854-PA |
| H. sapiens |
ENSP00000377674 |
| H. sapiens |
ENSP00000450245 |
| C. quinquefasciatus |
CPIJ004455 |
| A. gambiae |
AGAP010877 |