MidgeBase gene description page [Pn.10267]
Outline
| Gene ID | Pn.10267 |
| Type | Protein coding gene |
| Scaffold | PnScaf11147 |
| Start | 18408 |
| End | 21353 |
| Direction | + |
Sequence
Transcript: 2148 (bp)
ATGTCAGAAGCTGAAAGAAAGAGTGAAAATGAGGTCGAGGAGAAGCCGAAGGATGTCGAGCAGAGTCAGGAGAAGTTGAAATATCCTCGAGCCATTCCGTTCATCATTTCGAATGAGTTTTGCGAGCGATTCAACTTCTATGGAATGAAGGCAATTCTGGTGCTGTTCCTCACCCGAAAGCTCCTCTACAACGACGACGATGCAACAATCATTTACCACACGTTCAACTGCTTGGTGTACTTCTTCTGCATTTTCGGAGCCATCATTGCCGACTCGTGGTGGGGAAAATTCAAGACCATCCTCTGGCTGTCGATTGTATACGTGATTGGCTCGGGCACGATGGCACTGGCGGCAGTTGAGCCTTGGATCGACATTTCTCCCACTGCGAGAGCTCTCACGATGACAGGCCTGCTTTTGATTGCTTTAGGCAGCGGCGGAATCAAGCCGTGCGTTGCTGCCTTCGGCGGTGAACAGTTCAAGATGCCGGAGCAGGCTCGACAGCTGGCCACTTTCTTCTCGCTCTTCTACTTTTCCATCAATGCCGGCTCTCTGATTTCGACGTCCGTCACTCCGATCCTTCGCGAGGACATTCCTTGCTTCGGCATGGACGACTGCTTCCCGCTTGCCTTCGGCGTGCCGGCCATTCTGATGGTCGTCGCCATCTTGCTTTTTGTTTTCGGAAAGTTCCTCTACAAAATTCTCCCTAACCAGGGCAACATGCTAGTCAAAGTGTGCCGCTGCATCGGCAACGCACTCAAGACGAGAAAGCACGAAAAGGCGACGAATCCGCGCGAGCATTGGCTCGATTACGGCGAAGCCAAATACGGCCGAAAGCTTGTGCTCGAAACGAAGATTTTGCTCAACATCCTCGTCCTCTACCTACCGCTGCCGTTCTTCTGGGCGCTCTTCGATCAGCAGGGCAGTCGCTGGACCTTCCAGGCCACCAGAATGGACGGCGACATCGGCTTCTACACAATCAAACCGGATCAGATGCAGGTCGTCAATCCGTTACTCATTCTTATTTTCATTCCGCTCTACGAGGTCGCCTTTTATCCGCTCCTCAATCTTATCGGCGTACGACGACCACTTCAGAAATTGACGTTGGGCGGAATTTTGGCTGGCGTGAGTTTTGTGATTTCGGCAATTGTCGAGATTAATCTCGAGCCAACCTACGCCGTCCTTCCGGATTGGGGTCAAGGTCAGCTGAGGATGTACAACGGCCGCAACTGCAACTACACGATCGCGACTGACATTCCGAACCACGAGACGATTTCGCTCGATGCGCACTCCTACTTTGTGGAGCAGTTCATTCCGATCGAGAACGGCCAGACGACCTTCAACTACACTTTCGCGTCGAGCACCCCGAGCTGCGTCGACGACACCAACAGGGGATCTTTTGTGAAGACCGAGAGGATGGCGACGAGCTTCTTCCTCGAGGGCGACGACGGACTCACGCTCTTCCAGTTCGAGGACAGTCCCGAGAAGTCGCGACGTGGCTGGCCATTCATCACCGTTCTCGCGAACATCCGCTCGAGCACGGCGCGCATAAGGATGCTGGAGGATGGAAAAACTCAGCGCTACGACGAGACGGCCGACAACCGAAATCAAACCGACATCCAGGCCAACCGATACACGGTTTTCATCGACGACTTGGAGATCGCCAACGATGTTCGCTTCAACCTCGGCGGCGTGTACACGGTCATCATCAATCAGCTCACGGACACGACCTACCACTTCAGTCTCGTCACCGTCACCGAGCCGAACTCGGTCAGCATGCTCTGGCTGATTCCGCAGTATGTCGTCATCACACTCGGAGAGGTTATGTTCTCTGTCACGGGTCTCGAGTTCTCGTTTACGCAAGCACCTGAGAGCATGAAGTCCGTCATTCAAGGATGTTGGATGTTGACTGTCGCCTTCGGCAATCTGATCGTCGTCATCATAACGGGCGCGAAATTCTTCGAGTCACAGACCTACGAGTTCTTCCTGTTTGCCGGTCTCATGTTTGTCGACATGATCGTCTTCAGCTGGCTCGCCATTCGCTACAAGCCGATTCCACTGGACTTGCTTAAGGACACCGAGGAGAGCGAAGCGAGCGAGGACGAAAAGAAGCCGGCCTTGGATCTTAAGCTTGCTGACGAAAAAAGTTCC
Protein: 716 (aa)
MSEAERKSENEVEEKPKDVEQSQEKLKYPRAIPFIISNEFCERFNFYGMKAILVLFLTRKLLYNDDDATIIYHTFNCLVYFFCIFGAIIADSWWGKFKTILWLSIVYVIGSGTMALAAVEPWIDISPTARALTMTGLLLIALGSGGIKPCVAAFGGEQFKMPEQARQLATFFSLFYFSINAGSLISTSVTPILREDIPCFGMDDCFPLAFGVPAILMVVAILLFVFGKFLYKILPNQGNMLVKVCRCIGNALKTRKHEKATNPREHWLDYGEAKYGRKLVLETKILLNILVLYLPLPFFWALFDQQGSRWTFQATRMDGDIGFYTIKPDQMQVVNPLLILIFIPLYEVAFYPLLNLIGVRRPLQKLTLGGILAGVSFVISAIVEINLEPTYAVLPDWGQGQLRMYNGRNCNYTIATDIPNHETISLDAHSYFVEQFIPIENGQTTFNYTFASSTPSCVDDTNRGSFVKTERMATSFFLEGDDGLTLFQFEDSPEKSRRGWPFITVLANIRSSTARIRMLEDGKTQRYDETADNRNQTDIQANRYTVFIDDLEIANDVRFNLGGVYTVIINQLTDTTYHFSLVTVTEPNSVSMLWLIPQYVVITLGEVMFSVTGLEFSFTQAPESMKSVIQGCWMLTVAFGNLIVVIITGAKFFESQTYEFFLFAGLMFVDMIVFSWLAIRYKPIPLDLLKDTEESEASEDEKKPALDLKLADEKSS
| Type | Start | End | Length |
| CDS |
18408 |
18435 |
28 |
| CDS |
18922 |
19330 |
409 |
| CDS |
19399 |
19708 |
310 |
| CDS |
19781 |
20851 |
1071 |
| CDS |
20927 |
21053 |
127 |
| CDS |
21148 |
21350 |
203 |
| intron |
18436 |
18921 |
486 |
| intron |
19331 |
19398 |
68 |
| intron |
19709 |
19780 |
72 |
| intron |
20852 |
20926 |
75 |
| intron |
21054 |
21147 |
94 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663546 |
oligopeptide transporter [Aedes aegypti] gb|EAT45433.1| oligopeptide transporter [Aedes aegypti] |
0.0 |
| InterPro |
IPR018456 |
PTR2 family proton/oligopeptide symporter, conserved site |
|
| InterPro |
IPR000109 |
Oligopeptide transporter |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0006857 |
oligopeptide transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF00854.16 |
POT family |
8.7e-90 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.10268 |
| Pn.10264 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.00990 |
| P. vanderplanki |
Pv.01941 |
| C. quinquefasciatus |
CPIJ002172 |
| A. aegypti |
AAEL008381 |
| D. plexippus |
DPOGS214805PA |
| T. castaneum |
TC003455 |
| S. invicta |
SI2.2.0_12863 |
| D. melanogaster |
FBgn0015565 |
| H. sapiens |
ENSP00000295605 |
| A. gambiae |
AGAP010383 |
| A. gambiae |
AGAP012154 |
| D. plexippus |
DPOGS206127PA |
| N. vitripennis |
NV16820-PA |
| A. aegypti |
AAEL003318 |
| P. vanderplanki |
Pv.01943 |
| B. mori |
BGIBMGA012111-TA |
| M. musculus |
ENSMUSG00000025557 |
| C. quinquefasciatus |
CPIJ002831 |
| D. melanogaster |
FBgn0028491 |
| N. vitripennis |
NV12071-PA |
| P. humanus |
PHUM427360-PA |
| H. sapiens |
ENSP00000417085 |
| P. humanus |
PHUM397680-PA |
| B. mori |
BGIBMGA000496-TA |
| A. mellifera |
GB15994-PA |
| P. vanderplanki |
Pv.01944 |
| H. sapiens |
ENSP00000365686 |
| D. plexippus |
DPOGS214806PA |
| H. melpomene |
HMEL002828-PA |