MidgeBase gene description page [Pn.10243]
Outline
| Gene ID | Pn.10243 |
| Type | Protein coding gene |
| Scaffold | PnScaf11042 |
| Start | 17551 |
| End | 19552 |
| Direction | + |
Sequence
Transcript: 1644 (bp)
ATGGCATCAACGCGAGCATCATTGAAAATCCCGTCAAATCCAACAAAACAAATCACAACAAAACGAAAAGCCGATGCGACTGACGAATTGAAAAATGAGCGTGTAAAGAGATGTGCATTGACCAATTTGACAAATAATCTGAACAAAAATGAGACTGAGGAAAACAATTTGAAGAAGCCGTCAATTCTGAAAGATAATGTAACGAAAATTCAGCCGGTCAGCTATCGAACACGAGCTGCAGCTGCAGCTGCCGGTACTAATACTCACCTTCAACCACCGCCACAAAAGCCCGTAGTTAAAGCAAAGAAACTCAAGACAATAAACGAAAATAATGAGGTGAAGGTGAAAGAGTCGAAAAGTAAGGCGATTGGCACGACTGTTCTCAAATCAAAGTCCAGTACCGAAACTGCCCACAAGACGTCCATATCGTCGCGACGCATTTCATCAGAATTTGAAAAGACTGAAGACAGCCTCTATGTGTCGGCGCTAGAGGACATTCCCTCTGATATTTCCCGTCTTTCGGACAAGACAAAAAGCAGCATCGCCAGTTCGCAGGGCACGTCGTCCTCTCAAAACACAAGCATTGCGACCACAATATCGCAAATTGAAATCGACGAAACACCGCTTGAATGCCTCTACCGCCAACTACCTTCAGGCTTGAAGCACTTTGATCGCGAAAACTGGAACGATCCCTTCCAAGTGTCTCATTACGCAATGGACATTTTCGAATATTTGCGTCACCAAGAGGCCAAGTATCAGATAAAAGACTACATGAGCCAGCAGCCGGAGCTCTCGAAATGGATGCGATCACTGCTCGTCGACTGGATGGTTGAAGTGCAAGAAAGCTTCGAACTGAACCATGAAACTCTTTACCTCGCAGTTAAAATTGTCGATACATATCTCGGAAAGGAGCGCGTCGCGAAGGACGCCTTGCAATTGGTTGGTGCTGCTGCTTTGTTGATTGCATGTAAATATGATGAACGCACGCCGCCACTCGTGGAAGACTTTTTATTCATATGTGATGGGGCATATAAGCGCAATCAAATGCTAAAGATGGAGGCCAACGTTTTCCGCGCCATAAGCTATGATTTAGGCTTTCCGCTCTCCTATCGCTTCCTGCGCCGTTATGCTAGATGCGGAGGAGCTTCGATGGTAACATTAACTCTGGCCCGATTCATTTTGGAATACTCGCTCATGGACTACTCAACGATTCTGCTCTCAGACGCTAAAATGGCATGTGCTGCACTCTTTATTGCTCTCCGCATGACTGGCTCGGAGGGATGGAACGAGAGCCTCGAATACTACTCAGGATTCAAGCTGATGGATTTCGCTCCAATAATCGTGCTATTAAACACAATTCTACACCGTAAACCAAAGGAATCAGTTAGTACAGTAAGAAATAAGTACTCGCACAAAATTTTTCATCAAGTGACAACAATACCGCTAATGGATATTAACAAGCTCTTTGAAAACTATAACGAAGTTATTGAGAAGTTTACAACTACGCAATTGACATACAATCTGGTCGTCGAGTCCTGTTCATCGGCATCTTCGGTGACTGAAATCAAAGCCTTGCAAAAGTACAAGAAGGCAATGAGTGCAACCACATTCCCGCCAAAGTCAATGCCCCTACCACTTATTCGC
Protein: 548 (aa)
MASTRASLKIPSNPTKQITTKRKADATDELKNERVKRCALTNLTNNLNKNETEENNLKKPSILKDNVTKIQPVSYRTRAAAAAAGTNTHLQPPPQKPVVKAKKLKTINENNEVKVKESKSKAIGTTVLKSKSSTETAHKTSISSRRISSEFEKTEDSLYVSALEDIPSDISRLSDKTKSSIASSQGTSSSQNTSIATTISQIEIDETPLECLYRQLPSGLKHFDRENWNDPFQVSHYAMDIFEYLRHQEAKYQIKDYMSQQPELSKWMRSLLVDWMVEVQESFELNHETLYLAVKIVDTYLGKERVAKDALQLVGAAALLIACKYDERTPPLVEDFLFICDGAYKRNQMLKMEANVFRAISYDLGFPLSYRFLRRYARCGGASMVTLTLARFILEYSLMDYSTILLSDAKMACAALFIALRMTGSEGWNESLEYYSGFKLMDFAPIIVLLNTILHRKPKESVSTVRNKYSHKIFHQVTTIPLMDINKLFENYNEVIEKFTTTQLTYNLVVESCSSASSVTEIKALQKYKKAMSATTFPPKSMPLPLIR
| Type | Start | End | Length |
| CDS |
17551 |
17609 |
59 |
| CDS |
17684 |
18602 |
919 |
| CDS |
18677 |
18832 |
156 |
| CDS |
18905 |
19079 |
175 |
| CDS |
19215 |
19549 |
335 |
| intron |
17610 |
17683 |
74 |
| intron |
18603 |
18676 |
74 |
| intron |
18833 |
18904 |
72 |
| intron |
19080 |
19214 |
135 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001864470 |
G2/mitotic-specific cyclin-B3 [Culex quinquefasciatus] gb|EDS40251.1| G2/mitotic-specific cyclin-B3 [Culex quinquefasciatus] |
1e-121 |
| InterPro |
IPR004367 |
Cyclin, C-terminal |
|
| InterPro |
IPR013763 |
Cyclin-like |
|
| InterPro |
IPR006671 |
Cyclin, N-terminal |
|
| InterPro |
IPR015452 |
Cyclin B3, G2/mitotic-specific |
|
| InterPro |
IPR014400 |
Cyclin A/B/D/E |
|
| Gene Ontology(BP) |
GO:0010389 |
regulation of G2/M transition of mitotic cell cycle |
|
| Gene Ontology(BP) |
GO:0051726 |
regulation of cell cycle |
|
| Gene Ontology(BP) |
GO:0000079 |
regulation of cyclin-dependent protein kinase activity |
|
| Gene Ontology(CC) |
GO:0005634 |
nucleus |
|
| Gene Ontology(MF) |
GO:0019901 |
protein kinase binding |
|
| Pfam |
PF00134.18 |
Cyclin, N-terminal domain |
6.1e-39 |
| Pfam |
PF02984.14 |
Cyclin, C-terminal domain |
3.4e-23 |
| Pfam |
PF02097.10 |
Filoviridae VP35 |
5.4 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL009572 |
| M. musculus |
ENSMUSG00000051592 |
| N. vitripennis |
NV16541-PA |
| D. melanogaster |
FBgn0015625 |
| P. humanus |
PHUM433090-PA |
| S. invicta |
SI2.2.0_11506 |
| H. sapiens |
ENSP00000276014 |
| T. castaneum |
TC013167 |
| A. gambiae |
AGAP002478 |
| H. sapiens |
ENSP00000365210 |
| H. melpomene |
HMEL013299-PA |
| P. vanderplanki |
Pv.16915 |
| C. quinquefasciatus |
CPIJ014315 |
| B. mori |
BGIBMGA003777-TA |
| D. plexippus |
DPOGS210929PA |
| A. mellifera |
GB16395-PA |