MidgeBase gene description page [Pn.10203]
Outline
| Gene ID | Pn.10203 |
| Type | Protein coding gene |
| Scaffold | PnScaf10998 |
| Start | 1914 |
| End | 4427 |
| Direction | + |
Sequence
Transcript: 1140 (bp)
ATGTCAAAACAGAAAGTCAAAGTTCCCGACAGCCTTCGAGATGTACTACTAGAATTCTCAATTGCATACTTGCTCGAGCAGCCCGGCGATGTAATTGACTTCGCCGTCGATTTCTTTACAAAACTTCAAACAAATCGAGCACAAACGGGCATAGGTATCGGAGGCATCAACAAACCGTCGACGCCCGACGAGAGCATCATATCACAAGATGAGGAACCTCCTGTTAATCGCTTTGCTGCGGGACGACGAAAGTCGGTGTTTGCCGAGCAGTACGATCCCGAAGAGGATAACGACGACGAGGATAATAACAAGGTCATATTTCCAAAGACAGATGAGCAACGCAGCCGCCTTTGTGATTCTGTGAAAAATATTTTGCTCTTCCGTGCACTCGATCCGGAGCAGATGAATGAAATTCTTGACGCAATGTTTGAGAAGAAAGTGAAACCCGACGATGTGATTATTCGACAAGGCGACGACGGAGATAATTTTTACGTCATAGAATCTGGCATCTATAACGCATATGTTGGCGACGATAACAAACATGTGCACACATACGAGAACCGCGGATCGTTTGGCGAGCTAGCACTGCTTTACAATATGCCGCGCGCAGCGACAATTAGTGCCGTGAGCGAGGGTCAACTGTGGGCCCTCGATCGTCAAACATTCCGACGAATTCTTCTGAAGTCAGCGTTCCGAAAGAGAAAAATGTACGAGTCACTCATCAATAGTGTGCCAATGCTTAAAGCTTTACAAAATTATGAACGAATGAATTTGGCTGACGCCTTAGTTCCGAAGGTTTATGGCGATGGAGAACAAATTATTAAGCAGGGTGATGCCGCTGACGGCATGTACTTTATCGAGGAGGGAACTGTTTCAATTAAAATTCATCAAGACAGCGGCGAAACGGAGATTTCGAGGCTCGAGAAGGGACAATATTTCGGCGAATTGGCTTTAGTCACACACAAGCCGCGCGCTGCATCCGCATATGCTCAAAACAATGTGAAAGTTGCATTTATTGATGTCGAGGCATTTGAACGCTTACTCGGTCCGTGCATGGATATTATGAAGCGAAATATTGACGACTATGAGTCGCAGCTGCTGAAAATATTTGGCAGCAAATCCAACATTGCCGATATTCGA
Protein: 380 (aa)
MSKQKVKVPDSLRDVLLEFSIAYLLEQPGDVIDFAVDFFTKLQTNRAQTGIGIGGINKPSTPDESIISQDEEPPVNRFAAGRRKSVFAEQYDPEEDNDDEDNNKVIFPKTDEQRSRLCDSVKNILLFRALDPEQMNEILDAMFEKKVKPDDVIIRQGDDGDNFYVIESGIYNAYVGDDNKHVHTYENRGSFGELALLYNMPRAATISAVSEGQLWALDRQTFRRILLKSAFRKRKMYESLINSVPMLKALQNYERMNLADALVPKVYGDGEQIIKQGDAADGMYFIEEGTVSIKIHQDSGETEISRLEKGQYFGELALVTHKPRAASAYAQNNVKVAFIDVEAFERLLGPCMDIMKRNIDDYESQLLKIFGSKSNIADIR
| Type | Start | End | Length |
| CDS |
1914 |
2127 |
214 |
| CDS |
2735 |
2922 |
188 |
| CDS |
3280 |
3380 |
101 |
| CDS |
3501 |
3826 |
326 |
| CDS |
3925 |
4107 |
183 |
| CDS |
4297 |
4424 |
128 |
| intron |
2128 |
2734 |
607 |
| intron |
2923 |
3279 |
357 |
| intron |
3381 |
3500 |
120 |
| intron |
3827 |
3924 |
98 |
| intron |
4108 |
4296 |
189 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_315029 |
AGAP004940-PA [Anopheles gambiae str. PEST] gb|EAA10349.4| AGAP004940-PA [Anopheles gambiae str. PEST] |
1e-169 |
| InterPro |
IPR000595 |
Cyclic nucleotide-binding domain |
|
| InterPro |
IPR018488 |
Cyclic nucleotide-binding, conserved site |
|
| InterPro |
IPR012198 |
cAMP-dependent protein kinase regulatory subunit |
|
| InterPro |
IPR002373 |
cAMP/cGMP-dependent protein kinase |
|
| InterPro |
IPR003117 |
cAMP-dependent protein kinase, regulatory subunit, type I/II alpha/beta |
|
| InterPro |
IPR018490 |
Cyclic nucleotide-binding-like |
|
| InterPro |
IPR014710 |
RmlC-like jelly roll fold |
|
| Gene Ontology(BP) |
GO:0001932 |
regulation of protein phosphorylation |
|
| Gene Ontology(BP) |
GO:0007165 |
signal transduction |
|
| Gene Ontology(CC) |
GO:0005952 |
cAMP-dependent protein kinase complex |
|
| Gene Ontology(MF) |
GO:0008603 |
cAMP-dependent protein kinase regulator activity |
|
| Pfam |
PF00027.24 |
Cyclic nucleotide-binding domain |
2.2e-47 |
| Pfam |
PF02197.12 |
Regulatory subunit of type II PKA R-subunit |
2.9e-05 |
| Pfam |
PF12646.2 |
Domain of unknown function (DUF3783) |
0.14 |
| Pfam |
PF12196.3 |
FHA Ki67 binding domain of hNIFK |
0.028 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000265563 |
| N. vitripennis |
NV16166-PA |
| M. musculus |
ENSMUSG00000032601 |
| P. vanderplanki |
Pv.10613 |
| A. aegypti |
AAEL009216 |
| H. sapiens |
ENSP00000296446 |
| H. sapiens |
ENSP00000394041 |
| C. quinquefasciatus |
CPIJ004552 |
| D. plexippus |
DPOGS211789PA |
| S. invicta |
SI2.2.0_12675 |
| H. sapiens |
ENSP00000265717 |
| A. aegypti |
AAEL015314 |
| B. mori |
BGIBMGA004096-TA |
| H. sapiens |
ENSP00000440531 |
| M. musculus |
ENSMUSG00000002997 |
| D. melanogaster |
FBgn0022382 |
| A. gambiae |
AGAP004940 |
| H. melpomene |
HMEL007944-PA |
| T. castaneum |
TC009259 |
| A. mellifera |
GB14637-PA |
| P. humanus |
PHUM404250-PA |