MidgeBase gene description page [Pn.10139]
Outline
| Gene ID | Pn.10139 |
| Type | Protein coding gene |
| Scaffold | PnScaf10837 |
| Start | 23253 |
| End | 23885 |
| Direction | - |
Sequence
Transcript: 630 (bp)
ATGAGAGGATTGCCGGAACTTTTGAATTTTGTAGACGATATTTACAAGGTTTTTGAGGAGCCTCAAAAAGATCAGCTGACAGTTCCAACACTTCCACTAATTTACTTCGAAGAGAGACCGTCCCGACCCATTCTCAGAGCCGTTTCGAGGCCGATTCTTCGACACGCTTCACATCGATTGAATCCATACCCAAAATCCCGTAATGAAATTGCAAAAACAAAGGAGCAGCAAGGCCTTTCGTTCGCATTTGACGTTTCATCTTACAAGCCCGAGGAAATTTCCGTTCGAATGAAGGATCGTGACATAATTGTCGAAGCGAAGCACGAAGAGCGAGAAGATGAGCATGGATATATTTCGCGACAATTTACGCGACGATACGTTTTGCCTGATGATTATGATCCCGACACCGTCTCAACCTACTTGAGTGCAGATGGCAAAATGACAATCAAGGCACTCAAACCAAAGGCAGAGGCGCCTCATGAACGCATTATACCCATAAAGCGAGTGGTAGACGAGAAAATAGAGTGCGAAGAAGAAACGATGACTTTGGAAAAGAAAGGGGATTCGATTGAGTCAGATAAGGACAAGGAAAAGGAGAAAGAGAAGGAGCAGCAAAAGCAACAAGAGCCA
Protein: 210 (aa)
MRGLPELLNFVDDIYKVFEEPQKDQLTVPTLPLIYFEERPSRPILRAVSRPILRHASHRLNPYPKSRNEIAKTKEQQGLSFAFDVSSYKPEEISVRMKDRDIIVEAKHEEREDEHGYISRQFTRRYVLPDDYDPDTVSTYLSADGKMTIKALKPKAEAPHERIIPIKRVVDEKIECEEETMTLEKKGDSIESDKDKEKEKEKEQQKQQEP
| Type | Start | End | Length |
| CDS |
23256 |
23885 |
630 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADM13385 |
small heat shock protein 23 [Polypedilum vanderplanki] |
8e-62 |
| InterPro |
IPR001436 |
Alpha crystallin/Heat shock protein |
|
| InterPro |
IPR002068 |
Heat shock protein Hsp20 |
|
| InterPro |
IPR008978 |
HSP20-like chaperone |
|
| Pfam |
PF00011.16 |
Hsp20/alpha crystallin family |
6.7e-22 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02259 |