MidgeBase gene description page [Pn.10038]
Outline
| Gene ID | Pn.10038 |
| Type | Protein coding gene |
| Scaffold | PnScaf10629 |
| Start | 19211 |
| End | 22674 |
| Direction | + |
Sequence
Transcript: 1026 (bp)
ATGAGACTCGTGGCATGTGACAATAATGATGTGTACAAGTTTGTCGATTATCCGTTGTGCTCGGGCAGCAGGTCTCCGGGTCTGGCGGCCGACATGAAGTTCCGTCAGAATGTGATTGCCTTCATCGGACCGGCGTGCGCTTTCGCTCTGGAGCCCGTGGCGAGACTCGCCGACTTCTGGAACATTCCCATCATCACGGGAATGGGCGATCAGCCACCGGAGCAAGGGGAGCTGACGGTAACGAGCGGAATTCTCGGACGAATGACACAGAAATGGAAGAACGAGAGCTCCTTCTTCAAAGACAAGTCGCGCTATGCGACGCTCACCCGCATGTCGTACTGCCAGTGCAGATTAAAGCTCGTCTTCAAGAGCATCTTCAAGGAATTCGGGTTCAAGCATGTCGCGCTGCTCCTCGACCGCTCCGACCTCTTCTCGCTGACAGTCGGCAAGAACTTGGAGTACGGACTGAAGGAGGACGGCGTGCTGAAGCTGGTGAAGGAGCTCAACGGCAACGAGCTGCTGCGCGACGGGAAGCTCAACCGGACCGAGAGCGACAAGCTGATGCGAGACCTCAAGACTTACCTGCGTGACGCCTCAATGTATGCGCGAGTGATTATTTTGTCGGTGCGGGGACAGCTCGTGCGGCAATTCATGCTGGCCGCCTATCACTTGGGGATGACAAAAGGCGACTGGACCTTCCTCGACGTGGAAATCTTCCAATCATCTTATTGGGGCGATCATAATTGGGAAGAGGACGACGACAACGACCACATCGCGCGGAAGGCGTTCGAGGCGCTGCTGCGAGTGTCGCTCCTGCAGCCGACCAGTCCGAGGTTCAACCAGTTTGCCGACGAGGTGCGCGAGCGGGCGAAACACGACTACGCTTACTCGTTTTACGAGGGCGAGGAGGTGAACTTCTTCATCGGTGCCTTCTACGACGGCGTTCTTTTACTCGGAATGACTCTGAACGAGACGCTGACCGAAGGAGGTGACATACACGACGGAGTCGGAATAACGAGGAAAATG
Protein: 342 (aa)
MRLVACDNNDVYKFVDYPLCSGSRSPGLAADMKFRQNVIAFIGPACAFALEPVARLADFWNIPIITGMGDQPPEQGELTVTSGILGRMTQKWKNESSFFKDKSRYATLTRMSYCQCRLKLVFKSIFKEFGFKHVALLLDRSDLFSLTVGKNLEYGLKEDGVLKLVKELNGNELLRDGKLNRTESDKLMRDLKTYLRDASMYARVIILSVRGQLVRQFMLAAYHLGMTKGDWTFLDVEIFQSSYWGDHNWEEDDDNDHIARKAFEALLRVSLLQPTSPRFNQFADEVRERAKHDYAYSFYEGEEVNFFIGAFYDGVLLLGMTLNETLTEGGDIHDGVGITRKM
| Type | Start | End | Length |
| CDS |
19211 |
19257 |
47 |
| CDS |
19533 |
19698 |
166 |
| CDS |
21237 |
21314 |
78 |
| CDS |
21445 |
21821 |
377 |
| CDS |
21887 |
21938 |
52 |
| CDS |
22159 |
22189 |
31 |
| CDS |
22278 |
22435 |
158 |
| CDS |
22499 |
22549 |
51 |
| CDS |
22606 |
22671 |
66 |
| intron |
19258 |
19532 |
275 |
| intron |
19699 |
21236 |
1538 |
| intron |
21315 |
21444 |
130 |
| intron |
21822 |
21886 |
65 |
| intron |
21939 |
22158 |
220 |
| intron |
22190 |
22277 |
88 |
| intron |
22436 |
22498 |
63 |
| intron |
22550 |
22605 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001601255 |
PREDICTED: LOW QUALITY PROTEIN: atrial natriuretic peptide receptor 1-like [Nasonia vitripennis] |
1e-138 |
| InterPro |
IPR001828 |
Extracellular ligand-binding receptor |
|
| InterPro |
IPR001170 |
Natriuretic peptide receptor |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01094.23 |
Receptor family ligand binding region |
7.7e-59 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000398028 |
| H. sapiens |
ENSP00000388408 |
| M. musculus |
ENSMUSG00000022206 |
| B. mori |
BGIBMGA003981-TA |
| H. sapiens |
ENSP00000265074 |
| H. sapiens |
ENSP00000402490 |
| P. vanderplanki |
Pv.15259 |