MidgeBase gene description page [Pn.09937]
Outline
| Gene ID | Pn.09937 |
| Type | Protein coding gene |
| Scaffold | PnScaf10443 |
| Start | 19551 |
| End | 21268 |
| Direction | + |
Sequence
Transcript: 1656 (bp)
ATGTTGAATTATTTTGTTTACTTCTGTCTGATAACTGTTTTCAAGTTTCTCTGTGATTTACTTTTTGTCACTGAAACTTTTATCGACAGAACTTTACCTGAGCTGAGCACCTATGATTACATAATCGTCGGATCAGGTTCGGCCGGAGGAGTTTTGTCAAATTTAAAGGGAAATGTCCTGATAATTGAAGCCGGTGGCTATGGATCGGGTGTGTTCTTCAACATTCCTATTATTCAGCCTCTGTTGCTGCGGTCAAACTACGACTGGAAGCACGAAACAATTCCACAGAAATATGCATGCAATGCGATGAACGAAAACAAATGTTTTTGGCCGACTGGGAAAATTCTGTCTGGATCTCATCGACTCAACAACATGATTTACCACAGAGGCTACGAAGAGGACTTCAAAGAGATCGTAAACAAGTCAGCTGCTCAACAATACTTCGAGCAAGTAGAAAATGACGTTCCCGTCAGTGAAACCAATTTCAAGTCGAGACTGTCAGATGCCTTCATACGAGGAGCTAAAATGCTGGGATTTGATCATTTCAGCCACAACAACTTGACGCAACTAAATGGACAGCGATACACTCAGTTTTATAATTGGTGGCGACCGAAATCGGCGCCAGAAGTCGTCCTCAATGCAGCTGTCACCAAAGTTGTTTTTGACGGCAAGAAAGCAATTGGAGTCGACTTTATCAAGCGAGGAGTGTTGAGAAGAGTTTATGCGAAAAACATCGTGCTTTCGGCGGGAACGATGGGTTCAGCCAAAATCCTCCTTCACTCGGGAATCGGGCCAAAAGAGCATCTCGAGGAAATTGGCATCAAAGTCATTGAGAACCTGCCTGTCGGAGGAAATCTTCAAGATCACGTCACAACCAACATTGATTTGCTTATAAACCAAAGACTTGGCTGCTCAATCGAGGACATTCTCAATCCTTTCAAAGCGATAAAATATTTCTGGGAGGGCAGCGGTCCCCTCTCGCTTGCCGGCTCGGACGCAATGGGATTTGTGAGCTTCAATTCGTCCTCAGAAACGCCGGATGTGAGCTTTATTTTGTTGCCTGTCGGTTTCACGGATGACTTCGGCTTGCATCTTAGAAGAACGATCAACTTGAGGGACGCTGTGTGGGAGAAATATTACGAGCGTTTGGCTGGTCAACCGATAGCCACAATTCTGCCGATTATCCTCCATCCAAAGAGTCGCGGAAGCATTCGTCTGAAGAGTAGGGAATTTAGCGATCCGCTCCTCATCGATCCGAGGTACTACGAGTCCAAGGAGGATGCGAAAGCAATGATCAAGGCAATTCGAATTATTCAAAAGCTCATCGAAACACCGGCTATGAAGGAGTTCGATGCCGAACTGATACCAAAGTCACTTCCCGGCTGCGAAAACTTCGCATACGACTCCGACGATTACTGGGAGTGCTACGCCAAACAACTCACGCTGACCATGTATCATCCGGTTGGAACGTGTAAAATGGGCGAACACGACGACAGCACAACAGTTGTGCTGAAAAATTTCCAAGTAAAAAACATCGACAACTTATTCGTCGTGGACGCTTCGGTCATTCCGAGAGCGCCAAGTTCAAATCCACACGCATTAATTTCAATGTTAGCCCAAAAATTTGTACACGACATGAACACGATTAATAACGAA
Protein: 552 (aa)
MLNYFVYFCLITVFKFLCDLLFVTETFIDRTLPELSTYDYIIVGSGSAGGVLSNLKGNVLIIEAGGYGSGVFFNIPIIQPLLLRSNYDWKHETIPQKYACNAMNENKCFWPTGKILSGSHRLNNMIYHRGYEEDFKEIVNKSAAQQYFEQVENDVPVSETNFKSRLSDAFIRGAKMLGFDHFSHNNLTQLNGQRYTQFYNWWRPKSAPEVVLNAAVTKVVFDGKKAIGVDFIKRGVLRRVYAKNIVLSAGTMGSAKILLHSGIGPKEHLEEIGIKVIENLPVGGNLQDHVTTNIDLLINQRLGCSIEDILNPFKAIKYFWEGSGPLSLAGSDAMGFVSFNSSSETPDVSFILLPVGFTDDFGLHLRRTINLRDAVWEKYYERLAGQPIATILPIILHPKSRGSIRLKSREFSDPLLIDPRYYESKEDAKAMIKAIRIIQKLIETPAMKEFDAELIPKSLPGCENFAYDSDDYWECYAKQLTLTMYHPVGTCKMGEHDDSTTVVLKNFQVKNIDNLFVVDASVIPRAPSSNPHALISMLAQKFVHDMNTINNE
| Type | Start | End | Length |
| CDS |
19551 |
19677 |
127 |
| CDS |
19737 |
21265 |
1529 |
| intron |
19678 |
19736 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663267 |
glucose-methanol-choline (gmc) oxidoreductase [Aedes aegypti] gb|EAT34746.1| glucose-methanol-choline (gmc) oxidoreductase [Aedes aegypti] |
1e-117 |
| InterPro |
IPR000172 |
Glucose-methanol-choline oxidoreductase, N-terminal |
|
| InterPro |
IPR012132 |
Glucose-methanol-choline oxidoreductase |
|
| InterPro |
IPR007867 |
Glucose-methanol-choline oxidoreductase, C-terminal |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(BP) |
GO:0006066 |
alcohol metabolic process |
|
| Gene Ontology(MF) |
GO:0016614 |
oxidoreductase activity, acting on CH-OH group of donors |
|
| Gene Ontology(MF) |
GO:0008812 |
choline dehydrogenase activity |
|
| Gene Ontology(MF) |
GO:0050660 |
flavin adenine dinucleotide binding |
|
| Pfam |
PF00732.14 |
GMC oxidoreductase |
5.7e-38 |
| Pfam |
PF05199.8 |
GMC oxidoreductase |
5.3e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL002015-PA |
| A. aegypti |
AAEL013046 |
| B. mori |
BGIBMGA005545-TA |
| P. humanus |
PHUM500400-PA |
| T. castaneum |
TC006533 |
| N. vitripennis |
NV50015-PA |
| A. mellifera |
GB20126-PA |
| A. aegypti |
AAEL012808 |
| P. vanderplanki |
Pv.12181 |
| A. gambiae |
AGAP012112 |
| D. plexippus |
DPOGS215066PA |
| C. quinquefasciatus |
CPIJ019194 |