MidgeBase gene description page [Pn.09710]
Outline
| Gene ID | Pn.09710 |
| Type | Protein coding gene |
| Scaffold | PnScaf10058 |
| Start | 24202 |
| End | 24494 |
| Direction | + |
Sequence
Transcript: 225 (bp)
ATGCTGAATAAGGTAGATATCGAGGCAAATGTTGAAGGAGGCGGACAATCTGGGCAGGCTGGTGCAATAAGATGGGGAATTTCAATGGCACTGAGGAGTTTTGTGGATCCCGAGACTGTTGAAAAAATGCGATATGCCGGTTTACTACAGAGAGATTACCGTACAAAGGAGAGGAAGAAGCCTGGTCAAGAAGGCGCACGAAGAAAGTTCACGTGGAAGAAACGC
Protein: 75 (aa)
MLNKVDIEANVEGGGQSGQAGAIRWGISMALRSFVDPETVEKMRYAGLLQRDYRTKERKKPGQEGARRKFTWKKR
| Type | Start | End | Length |
| CDS |
24202 |
24337 |
136 |
| CDS |
24403 |
24491 |
89 |
| intron |
24338 |
24402 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661636 |
mitochondrial ribosomal protein, S9, putative [Aedes aegypti] gb|EAT36526.1| mitochondrial ribosomal protein, S9, putative [Aedes aegypti] |
7e-28 |
| InterPro |
IPR000754 |
Ribosomal protein S9 |
|
| InterPro |
IPR020568 |
Ribosomal protein S5 domain 2-type fold |
|
| InterPro |
IPR014721 |
Ribosomal protein S5 domain 2-type fold, subgroup |
|
| Gene Ontology(BP) |
GO:0006412 |
translation |
|
| Gene Ontology(CC) |
GO:0005840 |
ribosome |
|
| Gene Ontology(CC) |
GO:0005622 |
intracellular |
|
| Gene Ontology(MF) |
GO:0003735 |
structural constituent of ribosome |
|
| Pfam |
PF00380.14 |
Ribosomal protein S9/S16 |
9.7e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP010270 |
| N. vitripennis |
NV23872-PA |
| T. castaneum |
TC002716 |